Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00336 ATGAGGTTAACGTCACCTGCGGTTCTCAACCTTCTCATTCTCTGCGATCTGCTTCTCTGTCTTCCCTCATTCACTTTCTCTCTCCTCGCCGCTGACGCCGAGCGGGAGACGGAGCTTCTCCTCGCCGGAGACAACGCAACCGCCGTCGTTAATGCCTCGCTTGCGAGATCCGACGATGATAGCTTCGCGAACATGATTGATCGGGCTCTCGAAAGAGAGTTTCCCGATAATGAGCAGAATGAAGGTACCGATCCTGGTGGTTTCAACAACAGCGTTGCTGGACAGCAGGCTGTTTTGGAAACTGTTGCGAGAGTTATGCCCAAGAAAAATGAGAGCAAAGAGGAAAAGTCATTTCAGTTGCACGATGTTTTCAATTTGGATAATGAGAATAGGGCAGAGGATATGCCAACTTTAATTGATCGAAAGGACAATGTCTTTATCATATCCAATCCCAAGTCAAAGTATCCTGTTCTTCAATTAGACTTGAGATTGATATCAGATCTTGTGGTTGTCATTGTCTCTGCAACCTGTGGTGGCATTGCCTTTGCTTGTGCTGGACAACCGGTGATGACTGGATATCTGCTAGCAGGATCAATCATTGGACCAGGAGGTTTGAGTTTTGTTAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAGTTTGGTGTCATCTTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCAACAACAAAGCTTCGAGTTGTTCGAGCAGTGGCTATTCTTGGAGGCCTACTCCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACAGCTTCATTATGTGGTGGTAAATCATCTGAAGGAATATTTGTTGGTGCATTTCTATCCATGTCTTCAACAGCTGTGGTCTTGAAATTCTTAATGGAAAGGAATAGCGTCAATGCCCTTCATGGTCAGGTTACAATCGGAACTCTTATACTGCAGGATTGTGCTGTTGGTTTGCTCTTTGCCCTGCTTCCTGTTTTGGGTGGAACATCAGGTGTTCTTCAGGGAGTAGTATCCATGACCAAGTCGTTGGTGGTCTTAATTGCATTTTTGGCCATTTTGACAATATTATCTCGTACTTGTGTGCCATGGTTCCTTAAGCTTATGATAAGCTTATCCTCTCAGACCAATGAACTTTATCAATTGGCATCAGTGGCGTTCTGCCTACTTGTGGCTTGGTGTAGTGATAAGCTGGGTTTAAGCCTTGAACTTGGTTCCTTTGCTGCGGGAGTGATGATATCAACAACAGATCTCGGTCAACATACACTTGAACAAGTTGAGCCAATTCGCAACTTTTTTGCTGCTCTGTTCTTGGCCAGCATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCATGTTGACATTTTACTGGCAGCTGTTATATTGGTGATCATTATAAAAACAATTGTAGCTGTATGTGTTGTCAAGGGGTTTGGATACAACAACAAGACTTCACTTCTTGTTGGGATGTCCCTGGCACAAATTGGGGAATTTGCCTTCGTTCTTCTCAGTCGTGCTTCAAATCTTCATTTAGTTGAGGGAAAGTTGTATTTATTGCTCCTTGGAACAACAGCTCTTAGTCTGGTATGCATGCACTGTTCTATAGAATAG 1617 0.4348 MRLTSPAVLNLLILCDLLLCLPSFTFSLLAADAERETELLLAGDNATAVVNASLARSDDDSFANMIDRALEREFPDNEQNEGTDPGGFNNSVAGQQAVLETVARVMPKKNESKEEKSFQLHDVFNLDNENRAEDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVMTGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQIFLFMCLCGITASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVVSMTKSLVVLIAFLAILTILSRTCVPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLAAVILVIIIKTIVAVCVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVCMHCSIE 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00336 538 Gene3D - 162 538 IPR038770 -
Pumo6g00336 538 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 43 532 IPR045158 GO:0015386|GO:0071805|GO:1902600
Pumo6g00336 538 Pfam Sodium/hydrogen exchanger family 169 531 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00336 Pumo-Chr6 4410091 4418993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00336 7 531 Antiporters AT2G19600 82.075 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00336 K26735 - gmx:100788884 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00336 6 4410091 4418993 Pumo6g00336 6 4410091 4418993 ECH