Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00334 ATGAGCAGCCAAAAGGGTCGTCATGAAGAAGAGATGGGTACCTCAGAAACCACCGGTAAAGTGGTTGTGGTTGCAGTTAAGGCTTCTAGAGATATTTCAAGGACTGCTTTGGTGTGGGCTTTGACTCATGTTGTTCAGCCAGGGGATTGCATTAAGCTGTTGGTTGTCATTCCGGCTCTTTCCTCAAGCAAGAGGGTATGGGGACTTTCAAGATTTACTACTGATTGTGCCTCTAGTCATTGGAGATCCAGTTTAGGAACTATTTCAGATCAGAAAGAAGTTATTACAAATTCCTGTTCTCAATTAGTACTTCAACTCCATGATTTTTATGATCCAGAGAAGATAAAAATCAGAGTGAAGATTCTTTCTGGTTCTTTATGCGGAGCTGTTGCTGCTGAAGCCAAGAGAGTCCAGTCAAGCTGGGTTATATTGGACAAAAAATTGAAGCATGAAAAGAAATACTGCATGGAGCAGCTGCATTGCAATATTGTAATTATGAAGCGGTCTAGGCCAAAGATTCTGCGCTTGAATTTGAACAGTTCCTCTAAGATGGAACTAAACATGGCTTGTCCATTGACACTTACAAGAAACTTCAAAGACAACTCTGAACATGCAGATATAATTAGAGGTCCAGCTGTTACTCCTGCTAGTAGTCCTGAGCAAGGGTCACCACTACTGACTGCAACTGATATTGGAACATCATCCATATCAAGCTCAGATCCTGCAACTTCACCATTTTTCCACTCTGACAATTATGAAAGACAGAGGAGAGGTTTTACCTTTGTTCATGGGGGACTGACAAACCTGGAGGATATTGAGTCTGACTCTGAGAGTGAAAAGCTAAGTATGTCATCCAAGAACTCATATTTTCAGCCATGGATTGCAAATGTAATTTGCATGGATGGTGATTTCTCAAAACATGAGGACAACATGCAAAAATCCAGTGACAAGACTTTAGCTACCGCCTATGAAGTTTTGCTTCAGAAATTCTCAAAGTTGGATCAAGATCCTATCCTAGGAATGCTTAATTGTAAACTTGATGTGAACTTAAGCAAAAGTGTTAGAGAAGCAATTTCACTAGCTAAAACTTCACCTCCTGGACCTCCCCCATTATGCTCCATTTGTCAGCACAAGGCACCTGTGTTTGGCAATCCACCAAGGTGGTTTACATTTGCTGAATTGCTACTTGCCACAGGTGGTTTTTCACAAGCAAACTTCTTGGCTGAAGGTGGTTTTGGTTCTGTACACCGCGGTGTCCTACCTGATGGGCAAGTCATTGCTGTCAAGCAGTATAAATTAGCCAGTACTCAAGGAGATAAAGAGTTTTGCTCAGAAGTAGAGGTCTTAAGCTGTGCACAACATCGCAATGTTGTGATGCTAATAGGGTTCTGTGTGGAGGATGGAAGAAGATTGCTAGTTTATGAATACATCTGCAATGGCTCTCTGGATTCTCATCTCTACAGACGAAAGCAGAATGTACTGGAATGGTCTGCACGGCAAAAAATTGCAGTTGGGGCAGCTCGTGGTTTGAGATACCTTCATGAAGAATGTAGAGTGGGTTGCATTGTGCACCGTGACATGCGGCCTAACAATATCCTCCTCACTCATGATTTTGAAGCTTTAGTAGGAGATTTTGGACTTGCTAGGTGGCAACCAGATGGAGATATGGGTGTGGAAACCAGGGTGATAGGAACATTTGGGTATTTGGCGCCAGAATATGCTCAAAGTGGTCAAATAACTGAAAAAGCTGACGTGTACTCATTTGGGATAGTATTACTAGAGCTTGTCACAGGACGGAAAGCAGTGGATATAAACCGGCCCAAGGGCCAGCAATGCCTAAGTGAATGGGCACGCCCATTGCTTGAAAAACAAGCCATTTATAAACTAGTAGACCCGAGCTTAAGGAACAGCTATGTTGATCAAGAGGTTTATCGCATGCTGCAATGTTCCTCTTTGTGCATCGGACGGGATCCTCATTTAAGGCCTCGAATGTCTCAGGTGCTCAGGATGCTGGAAGGTGACATTCTCATGTGA 2034 0.4292 MSSQKGRHEEEMGTSETTGKVVVVAVKASRDISRTALVWALTHVVQPGDCIKLLVVIPALSSSKRVWGLSRFTTDCASSHWRSSLGTISDQKEVITNSCSQLVLQLHDFYDPEKIKIRVKILSGSLCGAVAAEAKRVQSSWVILDKKLKHEKKYCMEQLHCNIVIMKRSRPKILRLNLNSSSKMELNMACPLTLTRNFKDNSEHADIIRGPAVTPASSPEQGSPLLTATDIGTSSISSSDPATSPFFHSDNYERQRRGFTFVHGGLTNLEDIESDSESEKLSMSSKNSYFQPWIANVICMDGDFSKHEDNMQKSSDKTLATAYEVLLQKFSKLDQDPILGMLNCKLDVNLSKSVREAISLAKTSPPGPPPLCSICQHKAPVFGNPPRWFTFAELLLATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYRRKQNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDINRPKGQQCLSEWARPLLEKQAIYKLVDPSLRNSYVDQEVYRMLQCSSLCIGRDPHLRPRMSQVLRMLEGDILM 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00334 677 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 477 677 - -
Pumo6g00334 677 FunFam Dual-specific kinase DSK1-like 13 167 - -
Pumo6g00334 677 ProSiteProfiles Protein kinase domain profile. 401 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00334 677 CDD STKc_IRAK 407 673 - -
Pumo6g00334 677 SUPERFAMILY Protein kinase-like (PK-like) 381 672 IPR011009 -
Pumo6g00334 677 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 373 476 - -
Pumo6g00334 677 Pfam Protein tyrosine and serine/threonine kinase 405 671 IPR001245 GO:0004672|GO:0006468
Pumo6g00334 677 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Pumo6g00334 677 Gene3D Transferase(Phosphotransferase) domain 1 477 675 - -
Pumo6g00334 677 PANTHER OS01G0750732 PROTEIN 300 675 - -
Pumo6g00334 677 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00334 Pumo-Chr6 4385094 4389682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00334 360 667 Trihelix Transcription Factor Family AT1G68690 50.000 2.60e-100 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pumo6g00334 PK_Tyr_Ser-Thr 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00334 - - gmx:100305413 1303.5