Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00325 ATGGAAGGCTTAACAAAGCATAATAAAATGTCCTCTAATCCAGTAATACTGCAGAGTAAGAACTTGACCAAGTATATACTGGAGACCAGCGTTTACCCACGAGAAGCAGAGTCTCTCAAAGAGCTAAGGAATGCCACTGCAAGCCACCCTCGGGGCTTTATGGGCGCTGCTCCCGATGCGGGTCAGCTAATGGCCATGCTCTTGAAGCTGTTGAATGCTAAAAAGACTATTGAAGTGGGAGTTTTTACTGGATACTCTCTTCTCCTTACTGCACTTAACATTCCAGATGATGGAAAGATTATAGCCCTGGATCCAGACAGAGAAGCTTATGAGATAGGACTGCCATTCATTAAAAAGGCTGGTGTAGAGCACAAGATCGACTTCTTAGAGTCTCCAGCTTTACCCGTTCTTGATAAACTCTTAGAAGATCCTTCGAATAAGGGAAGTTTTGACTTTGCCTTTGTTGATGCTGATAAAGATAACTATTGGAATTACCACGAGCGGCTTCTTAAACTGGTCAAGATTGGTGGTTTAATCATCTATGATAACACTCTCTGGGGTGGAACTGTTGCCTGCCCTGAAGAGGAAGTTCCAGCACCCAAAAGAAGATTCAGGCAGGCTGCACTGGCTTTCAACAAAGCAATTGCAGATGATTCTCGTGTTGAAATTTCTGCTGTTTCAATAGGTGATGGCTTGACTATCTGCAGGCGTGCTCATTGA 720 0.4389 MEGLTKHNKMSSNPVILQSKNLTKYILETSVYPREAESLKELRNATASHPRGFMGAAPDAGQLMAMLLKLLNAKKTIEVGVFTGYSLLLTALNIPDDGKIIALDPDREAYEIGLPFIKKAGVEHKIDFLESPALPVLDKLLEDPSNKGSFDFAFVDADKDNYWNYHERLLKLVKIGGLIIYDNTLWGGTVACPEEEVPAPKRRFRQAALAFNKAIADDSRVEISAVSIGDGLTICRRAH 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00325 239 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 20 237 IPR029063 -
Pumo6g00325 239 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 15 238 IPR002935 GO:0008171
Pumo6g00325 239 CDD AdoMet_MTases 77 181 - -
Pumo6g00325 239 Gene3D Vaccinia Virus protein VP39 5 238 IPR029063 -
Pumo6g00325 239 PANTHER O-METHYLTRANSFERASE-RELATED 12 238 - -
Pumo6g00325 239 Pfam O-methyltransferase 28 237 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00325 Pumo-Chr6 4280421 4282090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00325 16 239 Monolignol Biosynthesis Gene Families AT4G26220 65.625 1.41e-111 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00325 K00588 - gmx:100792717 418.698