Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00311 ATGAAGATCGAGGAATTGGACGATGGAGAGTGTAGTAGGGACGAGGAAGAGAAGTGTGAGAGGCAGATTGTGAGCGTTGATGCCAAGAGAGCGTTGGTGGGAGCAGGTGCTCGGATCCTGTTCTATCCCACACTCTTGTATAATGTGCTTCGTAACAAGATTGAAGCTGAGTTCAGGTGGTGGGATCAAATTGACGAGTTTTTGCTACTGGGCGCTGTTCCGTTTCCCAAAGACGTTCCTCACTTGAAGAAGCTTGGTGTGGGTGGTGTGATTACTCTCAATGAGCCCTATGAAACCTTGGTGCCATCGTCCTTGTATCGTGCTCACGGGATTGATCATTTGGTCATTCCCACCAGAGATTATCTCTTTGCCCCCTCATTTGTTGATATCAACCTGGCTGTGCAGTTCATTCACCAGAATGCAACTTGCGGTAAAACTACTTATGTTCACTGTAAAGCTGGGCGGGGGAGGAGTACAACAATTGTGCTTTGTTATCTGGTCGAATACAAGCACATGACACCTGCTGCTGCCCTGGAATATGTTCGGTCTCGAAGACCTAGAGTGCTACTAGCACCATCACAATGGAAGGCTGTTCAAAACTATAACAAGCGAAGGCCATGTCCTTTACCATACTGTCCCTCTGGGGACGCAGTTCTTATAACCAAAGCTGATCTTGAAGGCTATCATAGCACATGTGATGCTGGTATGGAGCTGGCCATTGTTCCTAAAGTGCCAAAGACTAAGCCCATGATTGCAAGATTATCTTGCCTGTTCGCATCCTTAAAAGTATCCGGTAGTAGTGTACCAATGACCAGGCGGCTGCCGGTTTCTGAGTCACGTGCTTGCTAA 849 0.4759 MKIEELDDGECSRDEEEKCERQIVSVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDQIDEFLLLGAVPFPKDVPHLKKLGVGGVITLNEPYETLVPSSLYRAHGIDHLVIPTRDYLFAPSFVDINLAVQFIHQNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVQNYNKRRPCPLPYCPSGDAVLITKADLEGYHSTCDAGMELAIVPKVPKTKPMIARLSCLFASLKVSGSSVPMTRRLPVSESRAC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00311 282 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Pumo6g00311 282 FunFam Dual specificity phosphatase domain protein 60 206 - -
Pumo6g00311 282 Pfam Dual specificity phosphatase, catalytic domain 82 203 IPR000340 GO:0008138|GO:0016311
Pumo6g00311 282 CDD PTPMT1 60 204 IPR044596 GO:0004721
Pumo6g00311 282 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Pumo6g00311 282 Gene3D Protein tyrosine phosphatase superfamily 60 205 IPR029021 -
Pumo6g00311 282 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 260 - -
Pumo6g00311 282 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
Pumo6g00311 282 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 203 IPR029021 -
Pumo6g00311 282 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00311 Pumo-Chr6 4090367 4092876 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00311 4 270 Protein tyrosine phosphatase (PTP) family AT2G35680 51.603 6.02e-100 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00311 - - gmx:100817410 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00311 6 4090367 4092876 Pumo6g00311 6 4090367 4092876 ECH