Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00272 ATGGTGAGAGTGGTTTCCATGGCTTCTTCTTCGATTCGACCCACTCTCTTCTCCCTTAGGTTCTCAACACCTTCCTCTCTTTCTCTCTTCAACAACCCTTCTCGCCGTATCTCTTTCTCCCATCTTCCCTCTCCCTCTGTGTCTCAATCCAATAGTTTTGGCCTGAAAGCTTCCAGAGTGTCGGGACAAGATGGTAATTCCATGAGAGTCATGGCATCAGGGGACGTGACTCAATCAGTTGCGGCTGCTTCTCCAGAAAATGTGCTTGAGTGGGTCAAACAGGACAAGCGAAGAATGCTTCATGTTGTATATCGTGTGGGGGACTTGGACAGGACCATAAAGTTTTATACAGAGTGCCTAGGAATGAAGCTCCTCAGAAAGAGGGACATACCGGAGGAGAAATATACTAATGCCTTTCTTGGATATGGGCCCGAAGACTCACACTTTGTTATTGAACTGACATACAATTATGGAGTTGACAAGTATGATATTGGAACTGGATTTGGCCATTTTGGTGTTGCTGTTGATGATGTTGCAAAAGCAGTGGAGCTAATAAGAGCTAAGGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTCAAGGGAGGGCGTTCAGTAATTGCATTTATTGAAGATCCTGATGGTTACAAATTTGAACTTATAGAAAGAGGTCCCACTCCTGAACCCTTGTGCCAAGTAATGCTTCGAGTGGGTGATCTTAATCGTTCAATAGAATTTTACGAGAAGGCATTTGGTATGGAGTTGCTTCGTACACGAGACAATCCAGAATACAAGTATACCATAGCAATGCTGGGTTATGGTCCAGAAGATAAAAGCACTGTTCTGGAGTTGACTTACAATTATGGAGTCACTGAATACGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGCACAGATGATGTGTACAAAACTGCAGAAGCGATTAAACTAGCTGGAGGAAAGATTACTCGGGAACCTGGACCATTACCTGGTATCAACACAAAAATTACTGCATGCTTGGATCCTGATGGCTGGAAGTCGGTTTTTGTAGATAATGTTGATTTTCTAAAGGAGTTGGAATAG 1083 0.4331 MVRVVSMASSSIRPTLFSLRFSTPSSLSLFNNPSRRISFSHLPSPSVSQSNSFGLKASRVSGQDGNSMRVMASGDVTQSVAAASPENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGVAVDDVAKAVELIRAKGGKITREPGPVKGGRSVIAFIEDPDGYKFELIERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLAGGKITREPGPLPGINTKITACLDPDGWKSVFVDNVDFLKELE 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00272 360 ProSitePatterns Glyoxalase I signature 2. 165 177 IPR018146 GO:0004462|GO:0046872
Pumo6g00272 360 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 98 222 IPR037523 -
Pumo6g00272 360 FunFam Lactoylglutathione lyase 225 360 - -
Pumo6g00272 360 Gene3D - 69 223 IPR029068 -
Pumo6g00272 360 Gene3D - 225 360 IPR029068 -
Pumo6g00272 360 CDD GlxI_Ni 99 220 - -
Pumo6g00272 360 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 97 227 IPR029068 -
Pumo6g00272 360 CDD GlxI_Ni 229 350 - -
Pumo6g00272 360 FunFam Lactoylglutathione lyase 95 224 - -
Pumo6g00272 360 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 228 352 IPR037523 -
Pumo6g00272 360 NCBIfam lactoylglutathione lyase 98 223 IPR004361 GO:0004462|GO:0046872
Pumo6g00272 360 ProSitePatterns Glyoxalase I signature 1. 101 122 IPR018146 GO:0004462|GO:0046872
Pumo6g00272 360 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 229 350 IPR029068 -
Pumo6g00272 360 ProSitePatterns Glyoxalase I signature 1. 231 252 IPR018146 GO:0004462|GO:0046872
Pumo6g00272 360 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 231 346 IPR004360 -
Pumo6g00272 360 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 99 219 IPR004360 -
Pumo6g00272 360 PANTHER LACTOYLGLUTATHIONE LYASE 78 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00272 Pumo-Chr6 3581487 3586644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00272 231 349 Calmodulin-binding Proteins AT1G08110 28.276 9.15e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00272 K01759 - gmx:100780463 679.863