Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00250 ATGTATAGATCATTTCTAAGATGTGATGATCCAAAAGGAGTAGTAGAATGTGGGACAATCAGGAAATACAGGGCTCGTTCACACAAAGTGAAGGACAAGACAAGAATCCAGAAGACAGGTGAAAACTTGGAGACCTTGATGAACAAACGATGCAAAGAAGATAAAAAGGTACCAAAAGGATTTGATGGAAATCTCATTGGTCCATCATCTTTGCAGCTCACACAGGTTTCATGGTCTAGAGATATTATGTGTGATGGAAAGTCTAAAGATATTGCAAAAGGTATTGTAAAAGGAGCTCTTGGTCTGCAAGATTCTCTAATCATGCTTCGCAAGTTGCAAGAGGAGGCTCCACCACATACAGCTTCTTTTATGAGAAAACAGACTATGAAACCTGAAAGAGACAGAATTGATGCAAAGATGATTCGAAGACCACAGCCTTCAGCTGGTGGTTCTTCAAGTAATTGCCAAGAGGAACTTAAGAAGGTGATTAAGGAGAGTTTGGTTAGGCAAACTATGTTTCAAAAGACCGCTGAAAGATTGGATTCGGGTTTAGAAACTTTTTCTACAAACACAAGCCAATATTCTGGGGTCAGGACTAACGGCCTTTCTGATCCTTCCTTCTCAGTAATAACTTCAAAGATGGAAAGAGGACCTAGCCTAGTTTTCAAGCTGATGGGTTTAGAAGAAGCTCCCTCAAGATCATTTCCAACTGTTAAGCAGAAACTGTTGGATGGTGACATAGATATGTCAAAGGTAAGAAAGAATGATTCTATAGCTGAGAAGGTTAATCCAGAACAAAAGGCCCCGAGGGAAACTCTTAACACCTTGCATTTCAAAGGTATTTTGAAGGAGAGTTTTGTCAAAGAGCCTAAGCTTCATGTGCATCATTTCAATGATACCAATTCCAAGCAGTTTGGTGATTTATCTCACATTGCACATATCAAACCTCAATGTACTTATATGCCATTTCCTCCAAAAGAGTTACCCATAACAAAACTGAAACCAGAAATAGCCTCTACCAAAACTATCAAATACAGAAAAGGTTCCAGTTCCACCAACATGGGAAAAGTAATGGAAAAAGGTATATGCAAACAGGTTAACAAAGAGGAAGGACCTAAATTTCTCAAAGAGGATATGAAACTGGATGCAAAAGGGGTCAATCCTGTTGAAGAATCATCAGGTAAGGTAAAGCTGTATTGTCACATTGGTCACACATCACAGGCAAATGAGACAATTGATAAAAAATGGAAGGTACAGTCCATTAGTAGAAAACAACCAGAAAAGGATATCTCACAACCTATAATTGTGACAACAAGACCTCAATATCAACGAGGAATCCCCTCCACAAAGTTGAGGAAGCTAAAAAGTGGGTCCAGAATTGACAAGAATGAGATTTCCTGCCTAAAGAGCACAGGTTCAAACAACATCTCCATCTCTAAAACAAAGTCACAAAAAACTAATGATTCCAAGGACATTAATATTGAGATTAAAAAAATTGATTCTGTGGTAGATTCCTTAACAGGTAGAAAGAATCAGATGAAGAACCAAAGCCCAGTTGCTGAGCCTGAACCAGCTAAACTAACTATTGAACAAATCAGGCAGGGAGAAGAGAAGAAAAATTACACTGGGATTAGTGCACTAGAAGATGAACTCCTGATGGTGTGTGAAGCAGATGCCTACATAAATAAGATTGGAGAAAAATGCAAGCAGAGAAAGAGTTCTTCAGGCAATGACATTATTATGCTGCTCAAGTCTGAACATGGAAATGATGCTGTCACTGCTTATAGCATTAATGCTGATAAAGAGGGGACTGAGCTGAAACATTTTCTTTTAACCAGTCCTTCATTCATTGGACATGCAAAGAAGCTCTTCAATCTTGATGCGGATTGCCCCAACATCCTACAAAAGGATGAAACTATTTACAGCATGGTCAATCTCAGGCTTTATTTGGATTGTGCATATGAACTCACTGAGCGTAAAAGCCTTCAAGAGTCACAAGTAGTTCGTTCTTTCTTGCTAGCTTGTGGGGGAAACTCAAGATTACACATATCCTTAGGCAGGTTGGTTGAAGAAATCTGTAATGGCATTGAGAATCTGAAATTTTACAGAGAAGATTCTGGGGAGGAAGAGTTTGCAGGCAATGATGTCTTTGCAATGATGGAGAAAGATATGAAGTGCAATGGAGAGATAAATGGTATGTGGGAGAGGGGTTGGAAGCTAGGATTTTCTGCAGATGAGGCTGAACTAGTTGTCAATAAAATAGAGAGCCTGCTTATAAGTGGATTAATTGAGGAGGTTATTATAAATTTATGA 2313 0.3887 MYRSFLRCDDPKGVVECGTIRKYRARSHKVKDKTRIQKTGENLETLMNKRCKEDKKVPKGFDGNLIGPSSLQLTQVSWSRDIMCDGKSKDIAKGIVKGALGLQDSLIMLRKLQEEAPPHTASFMRKQTMKPERDRIDAKMIRRPQPSAGGSSSNCQEELKKVIKESLVRQTMFQKTAERLDSGLETFSTNTSQYSGVRTNGLSDPSFSVITSKMERGPSLVFKLMGLEEAPSRSFPTVKQKLLDGDIDMSKVRKNDSIAEKVNPEQKAPRETLNTLHFKGILKESFVKEPKLHVHHFNDTNSKQFGDLSHIAHIKPQCTYMPFPPKELPITKLKPEIASTKTIKYRKGSSSTNMGKVMEKGICKQVNKEEGPKFLKEDMKLDAKGVNPVEESSGKVKLYCHIGHTSQANETIDKKWKVQSISRKQPEKDISQPIIVTTRPQYQRGIPSTKLRKLKSGSRIDKNEISCLKSTGSNNISISKTKSQKTNDSKDINIEIKKIDSVVDSLTGRKNQMKNQSPVAEPEPAKLTIEQIRQGEEKKNYTGISALEDELLMVCEADAYINKIGEKCKQRKSSSGNDIIMLLKSEHGNDAVTAYSINADKEGTELKHFLLTSPSFIGHAKKLFNLDADCPNILQKDETIYSMVNLRLYLDCAYELTERKSLQESQVVRSFLLACGGNSRLHISLGRLVEEICNGIENLKFYREDSGEEEFAGNDVFAMMEKDMKCNGEINGMWERGWKLGFSADEAELVVNKIESLLISGLIEEVIINL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00250 770 PANTHER OS01G0228800 PROTEIN-RELATED 1 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00250 Pumo-Chr6 3377584 3381270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00250 591 767 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 31.351 6.95e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00250 - - gmx:102667535 1180.62