Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00245 ATGTTCCGATCCTCATTCGGGTCCTGCAGGACCCGTAACCTAACAGATGTAATGGAAAAAGCGGTGTTTGCACCACCCAACCCGATCGAACCACCCTCCCCCAAAACGCGACCCTTTCCCCCCATTTGTAGGCCCAAAACCATCAACGACACTTGCCTCCTGTCGTTTAAGGATTCTCATTCTATCCCCAGACGCAAAGTCTCCGAGTGGTCATCACCTTTTGTCTGGGGTGGCAGCAGCAACCTCAACCTTAACCTCGGTGTCATGTCGTGCCCCCCCACTTCCCCAAACATTTCCCTCAACACAATCCACCAACACGATTTCGGTTTCGACGACAAAAAAAAGGTTTCAACGAAAAATGCCAAGACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGACGTACCCAGAAGAAAAGGGAGTTTTTCCCTTTCAATTCATGCGCCAAAGACACCAACTTTGGTGGTTACTGGTGGTATAGCAGTGACGAAGACGACGAAACCGACACCCTTTTCTCCTCCAAAAGCCTCTCCTCCGACTCCTCCCGGTCCCGGCGCCGGTGCGGGAAAAATGACCGGAGCTCCGACATGGGTGTTCTGCCCCTGCACGGGAAGGTGAAGGACACGTTCGCGGTGGTGAAGCGCTCCAGCGACCCTTACAGTGATTTCAGGACTTCGATGCTAGAAATGATCGTTGAGAAGCAGATTTTTTCGCCCGCGGATTTGGAGAATCTGTTGCAGTGTTTTCTGTCGCTGAATTCGTATCATCATCACAAGATCATTGTCCAAGTCTTCACCGAGATTTGGGAGGCTTTGTTCTCTGACTGGTTTTGA 834 0.506 MFRSSFGSCRTRNLTDVMEKAVFAPPNPIEPPSPKTRPFPPICRPKTINDTCLLSFKDSHSIPRRKVSEWSSPFVWGGSSNLNLNLGVMSCPPTSPNISLNTIHQHDFGFDDKKKVSTKNAKTKKKKKKKKKKRRTQKKREFFPFNSCAKDTNFGGYWWYSSDEDDETDTLFSSKSLSSDSSRSRRRCGKNDRSSDMGVLPLHGKVKDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPADLENLLQCFLSLNSYHHHKIIVQVFTEIWEALFSDWF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00245 277 NCBIfam uncharacterized plant-specific domain TIGR01568 210 273 IPR006458 -
Pumo6g00245 277 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 114 274 IPR038933 GO:0045892
Pumo6g00245 277 MobiDBLite consensus disorder prediction 173 196 - -
Pumo6g00245 277 Pfam Transcriptional repressor, ovate 216 273 IPR006458 -
Pumo6g00245 277 MobiDBLite consensus disorder prediction 119 138 - -
Pumo6g00245 277 ProSiteProfiles OVATE domain profile. 212 271 IPR006458 -
Pumo6g00245 277 MobiDBLite consensus disorder prediction 111 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00245 Pumo-Chr6 3320010 3321016 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo6g00245 Ovate 2.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00245 - - gmx:100776613 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00245 6 3320010 3321016 Pumo6g00245 6 3320010 3321016 ECH