Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00232 ATGAGTGCTCTCTCTAACTCCAGTGGTGGCCACGCCAGCTCCTTCCTCAAAATGCCCACCATCAAGTTTACCAAGCTCTTCATCAATGGAGATTTTGTTGATTCCATATCAGGAAGGACATTTGAGACTATAGATCCCAGAACAGAAGAGGTGATTGCAAGAGTTAGTGAGGGAGATAAAGAAGACATTGACATTGCTGTCAAAGCAGCACGTCAGGCTTTTGACTCAGGTCCATGGCCTCGCTTGCCCGGCTCTGAAAGAGGAAAAATTATGATGAAATGGGCAGAGCTAATTGATGAAAACATAGAAGAAGTAGCGGCATTAGATACCATTGATGCTGGCAAGCTGTACTTTATTAATAAGGTTGTGGAAATTCCTTCAGCTGCAAGTGCACTACGCTACTATGCAGGTGCTGCTGATAAAATTCATGGCGACGTATTAAAAATGAACGGGGATTTCCATGCATATACACTCTTGGAACCAATTGGTGTTGTGGGACACATAATTCCATGGAATGCCCCCAGCCTCTCCTTTTTCATCAAGGTTAGCCCTGCCTTAGCTGCAGGCTGCACCATGGTCCTCAAGCCTGCTGAACAAACACCTCTCTCTGCTTTGTTTTATGCTCATCTAGCTAAGTTGGCTGGAATCCCAGATGGAGTTCTCAATGTGGTACCCGGATTTGGCCCAACTGCTGGTGCTGCAATAACCTCACACATGGACATAGATGCGGTCAGTTTTACTGGTTCAGTTGAAGTAGGGCGTGAAGTGATGCAAGCTGCAGCTAGGAGCAACTTAAAACCGGTTTCACTGGAATTAGGAGGCAAGTCTCCTCTCATTATTTTCGATGATGCTGATATAGACAAAGCTGCCGAGCTTGCTCTCTTTGGCATCATGTCTAACAAGGGAGAAATTTGTGTGGCAAGTTCTCGTGTGTTCGTCCAGGAAGGGATCTATGATGAATTTGAGAAGAAGTTGGTGGAGAAGGCAAAATCTTGGGTCGTTGGGGATCCTTTTGATCCCAAGTCGCTGCAAGGGCCTCAAGCTGACAGGAACCAATTGGAGAAAATACTTTCCTATATTGAGCATGGAAAGAGAGAAGGGGCTACCCTTTTGACAGGAGGTAACACGGTGGGCAACAAAGGTTACTACATAGAACCTACAATTTTCTCCAATGTAAAGGAGGACATGATTATAGCACGGGATGAAATATTTGGCCCTGTACTATCACTGATGAAGTTTAAGACAATGGAGGAAGCAATTAAAAGTGCTAACAATACCAAGTATGGCCTAGCAGCAGGCATTGTGACCAAGAATTTGGATACTGCAAACACTATGTCAAGGTCCAGTCGTGCAGGCATTGTTTGGATCAACTGCTATTTTACCGTAGGGAGTGACGTTCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTTGGGATTACAGGCCCTTCACAAGTACTTACAAGTTAAATCTGTTGTAACTACCTATTCACAAATCTCCTTGGCTTTGAAGTATTCAATGTCTCCTACGTGA 1539 0.4444 MSALSNSSGGHASSFLKMPTIKFTKLFINGDFVDSISGRTFETIDPRTEEVIARVSEGDKEDIDIAVKAARQAFDSGPWPRLPGSERGKIMMKWAELIDENIEEVAALDTIDAGKLYFINKVVEIPSAASALRYYAGAADKIHGDVLKMNGDFHAYTLLEPIGVVGHIIPWNAPSLSFFIKVSPALAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGPTAGAAITSHMDIDAVSFTGSVEVGREVMQAAARSNLKPVSLELGGKSPLIIFDDADIDKAAELALFGIMSNKGEICVASSRVFVQEGIYDEFEKKLVEKAKSWVVGDPFDPKSLQGPQADRNQLEKILSYIEHGKREGATLLTGGNTVGNKGYYIEPTIFSNVKEDMIIARDEIFGPVLSLMKFKTMEEAIKSANNTKYGLAAGIVTKNLDTANTMSRSSRAGIVWINCYFTVGSDVPFGGYKMSGFGRDLGLQALHKYLQVKSVVTTYSQISLALKYSMSPT 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00232 512 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 17 494 - -
Pumo6g00232 512 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 492 IPR016162 GO:0016491
Pumo6g00232 512 SUPERFAMILY ALDH-like 15 499 IPR016161 GO:0016491
Pumo6g00232 512 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 274 463 IPR016163 GO:0016620
Pumo6g00232 512 FunFam Aldehyde dehydrogenase3 274 463 - -
Pumo6g00232 512 Pfam Aldehyde dehydrogenase family 33 494 IPR015590 GO:0016491
Pumo6g00232 512 FunFam Aldehyde dehydrogenase, putative 466 492 - -
Pumo6g00232 512 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 28 292 - -
Pumo6g00232 512 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 270 277 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00232 Pumo-Chr6 3161933 3166559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00232 11 495 Aldehyde Dehydrogenase Gene Family AT3G24503 69.136 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00232 K12355 - gmx:100527654 933.324