Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00216 ATGTATCCTTCAATCCTCCTCCTCCTCCTTTCAACCTTCATAATATTCATTCTCTCCGCCATCTTCATTCTGCGTCCAAAACAGAGCAAAGATGATCCGCCAGGTCCACCGGCCTTCCCGGTGATCGGTAACCTGCACCTGTTGGGGAAGCTCCCACACCGCACCCTCCAAGCCTTGGCCCAACGATACGGGCCCGTCATGTCCCTACGCCTCGGGCAGGTCCCACACGTGGTGGTGTCCTCCTCAGAGGCCGCGGAACACTTCCTCAAAACTCACGACGCCGTTTTCGCCAGCCGTCCCAGGCTCGAAGCCTCCAAGTACTTCGGCTACGGCTCCAAGGGCTTGGCCTTCTCCGAGTACGGCCCATACTGGCGAAACATGAGGAAAGTGTGCACGCTCCAACTTCTGAGCGCGTCCAAGGTGGGGTCCTTCGCGCCTCTTAGGAAGAGGGAGCTGGAGCTGGCGGTGAAGTCGCTCCAGGAACCCGCAAGGAAAGGCGAGGTGGTGGACCTTAGCGGGGTGGTGCACAACGTGGTGGAGGAGATTGTGTACAAGATGGTGTTGGGGTGTAGCAAGCATGATGAGTTTGATTTGAAGGGGTTGATTCAGAATGGGATGAACCTTATTGGTGCCTTTAATCTAACAGATTATGTGCCCTGGCTTGGAGCTTTGGATCTTCAGGGATTAAATCGAAGTTACAAGAGAATTAGTAAAGCACTTGGCCAAGTGATGGAAAAGATAATTAATGAACATGAACACGGTTCAGATGTACAAAATGAACAACACCATAAGGACTTCGTAGACATATTACTCTTGTTGATGCACCAGCCTATCAATCCCTATGATGAACAAAACCATGTCATTGATCAAACAAACATTAAGGCTATACTCTTAGATATGATTGCTGGGGCATTTGAAACTTCTGCAACTGTTGTGGAGTGGACGTTATCCGAGCTCCTAAGGCATCCAAGAGTGATGAAAAACCTTCAAGATGAGCTAGATAATGTGGTTGGGAGGGACAAAATGGTGGAGGAAAATGATTTGGCAAAGTTAAGTTACTTGGATATTGTGATCAAGGAGACCTTGAGATTATATCCTCCAGGACCATTAGTCCCCCGAGAGTCAACGGAGGATGCTATGGTTCAGGGTTATTTCTTAAAGAAAAAATCAAGAATCATCGTAAATTTATGGGCAATAGGAAGAGATTATAATATATGGTCTGATAATGCTGAAGTATTTTATCCAGAGAGATTCACCAATAACAATTTAGACTTTCGAGGACTTGACCTCCAATATATACCATTTGGTTTTGGTCGAAGGGGATGCCCTGGAATAAACTTAGGCTTAGCAACAGTTAAAATTGTTGTCGCTCAATTAGTACATTGCTTTAGTTGGGAACTTCCAGGAGGTATGACCCCAGGTGAGTTGGACATGAGTGAGAAATTTGGCCTCACAATACCAAGAGTCAAGCACTTGCTTGCTGTGCCCAGGTATCGTCTTCTCAGGGAAGCTTGTAATGAATCAAAATAA 1530 0.468 MYPSILLLLLSTFIIFILSAIFILRPKQSKDDPPGPPAFPVIGNLHLLGKLPHRTLQALAQRYGPVMSLRLGQVPHVVVSSSEAAEHFLKTHDAVFASRPRLEASKYFGYGSKGLAFSEYGPYWRNMRKVCTLQLLSASKVGSFAPLRKRELELAVKSLQEPARKGEVVDLSGVVHNVVEEIVYKMVLGCSKHDEFDLKGLIQNGMNLIGAFNLTDYVPWLGALDLQGLNRSYKRISKALGQVMEKIINEHEHGSDVQNEQHHKDFVDILLLLMHQPINPYDEQNHVIDQTNIKAILLDMIAGAFETSATVVEWTLSELLRHPRVMKNLQDELDNVVGRDKMVEENDLAKLSYLDIVIKETLRLYPPGPLVPRESTEDAMVQGYFLKKKSRIIVNLWAIGRDYNIWSDNAEVFYPERFTNNNLDFRGLDLQYIPFGFGRRGCPGINLGLATVKIVVAQLVHCFSWELPGGMTPGELDMSEKFGLTIPRVKHLLAVPRYRLLREACNESK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00216 509 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00216 509 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00216 509 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00216 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Pumo6g00216 509 Gene3D Cytochrome P450 23 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00216 509 SUPERFAMILY Cytochrome P450 29 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00216 509 PANTHER CYTOCHROME P450 93A3-LIKE 8 500 - -
Pumo6g00216 509 Pfam Cytochrome P450 33 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00216 509 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00216 509 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00216 509 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00216 509 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00216 509 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00216 509 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00216 509 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00216 509 CDD CYP71-like 62 492 - -
Pumo6g00216 509 FunFam Cytochrome P450 83B1 21 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00216 Pumo-Chr6 2982850 2985203 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00216 4 500 Cytochrome P450 AT5G07990 40.234 2.16e-122 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00216 - - gmx:100814172 843.188