LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo6g00216	ATGTATCCTTCAATCCTCCTCCTCCTCCTTTCAACCTTCATAATATTCATTCTCTCCGCCATCTTCATTCTGCGTCCAAAACAGAGCAAAGATGATCCGCCAGGTCCACCGGCCTTCCCGGTGATCGGTAACCTGCACCTGTTGGGGAAGCTCCCACACCGCACCCTCCAAGCCTTGGCCCAACGATACGGGCCCGTCATGTCCCTACGCCTCGGGCAGGTCCCACACGTGGTGGTGTCCTCCTCAGAGGCCGCGGAACACTTCCTCAAAACTCACGACGCCGTTTTCGCCAGCCGTCCCAGGCTCGAAGCCTCCAAGTACTTCGGCTACGGCTCCAAGGGCTTGGCCTTCTCCGAGTACGGCCCATACTGGCGAAACATGAGGAAAGTGTGCACGCTCCAACTTCTGAGCGCGTCCAAGGTGGGGTCCTTCGCGCCTCTTAGGAAGAGGGAGCTGGAGCTGGCGGTGAAGTCGCTCCAGGAACCCGCAAGGAAAGGCGAGGTGGTGGACCTTAGCGGGGTGGTGCACAACGTGGTGGAGGAGATTGTGTACAAGATGGTGTTGGGGTGTAGCAAGCATGATGAGTTTGATTTGAAGGGGTTGATTCAGAATGGGATGAACCTTATTGGTGCCTTTAATCTAACAGATTATGTGCCCTGGCTTGGAGCTTTGGATCTTCAGGGATTAAATCGAAGTTACAAGAGAATTAGTAAAGCACTTGGCCAAGTGATGGAAAAGATAATTAATGAACATGAACACGGTTCAGATGTACAAAATGAACAACACCATAAGGACTTCGTAGACATATTACTCTTGTTGATGCACCAGCCTATCAATCCCTATGATGAACAAAACCATGTCATTGATCAAACAAACATTAAGGCTATACTCTTAGATATGATTGCTGGGGCATTTGAAACTTCTGCAACTGTTGTGGAGTGGACGTTATCCGAGCTCCTAAGGCATCCAAGAGTGATGAAAAACCTTCAAGATGAGCTAGATAATGTGGTTGGGAGGGACAAAATGGTGGAGGAAAATGATTTGGCAAAGTTAAGTTACTTGGATATTGTGATCAAGGAGACCTTGAGATTATATCCTCCAGGACCATTAGTCCCCCGAGAGTCAACGGAGGATGCTATGGTTCAGGGTTATTTCTTAAAGAAAAAATCAAGAATCATCGTAAATTTATGGGCAATAGGAAGAGATTATAATATATGGTCTGATAATGCTGAAGTATTTTATCCAGAGAGATTCACCAATAACAATTTAGACTTTCGAGGACTTGACCTCCAATATATACCATTTGGTTTTGGTCGAAGGGGATGCCCTGGAATAAACTTAGGCTTAGCAACAGTTAAAATTGTTGTCGCTCAATTAGTACATTGCTTTAGTTGGGAACTTCCAGGAGGTATGACCCCAGGTGAGTTGGACATGAGTGAGAAATTTGGCCTCACAATACCAAGAGTCAAGCACTTGCTTGCTGTGCCCAGGTATCGTCTTCTCAGGGAAGCTTGTAATGAATCAAAATAA	1530	0.468	MYPSILLLLLSTFIIFILSAIFILRPKQSKDDPPGPPAFPVIGNLHLLGKLPHRTLQALAQRYGPVMSLRLGQVPHVVVSSSEAAEHFLKTHDAVFASRPRLEASKYFGYGSKGLAFSEYGPYWRNMRKVCTLQLLSASKVGSFAPLRKRELELAVKSLQEPARKGEVVDLSGVVHNVVEEIVYKMVLGCSKHDEFDLKGLIQNGMNLIGAFNLTDYVPWLGALDLQGLNRSYKRISKALGQVMEKIINEHEHGSDVQNEQHHKDFVDILLLLMHQPINPYDEQNHVIDQTNIKAILLDMIAGAFETSATVVEWTLSELLRHPRVMKNLQDELDNVVGRDKMVEENDLAKLSYLDIVIKETLRLYPPGPLVPRESTEDAMVQGYFLKKKSRIIVNLWAIGRDYNIWSDNAEVFYPERFTNNNLDFRGLDLQYIPFGFGRRGCPGINLGLATVKIVVAQLVHCFSWELPGGMTPGELDMSEKFGLTIPRVKHLLAVPRYRLLREACNESK	509

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo6g00216	509	PRINTS	P450 superfamily signature	356	367	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo6g00216	509	PRINTS	P450 superfamily signature	433	442	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo6g00216	509	PRINTS	P450 superfamily signature	303	320	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo6g00216	509	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	435	444	IPR017972	GO:0005506\|GO:0016705
	Pumo6g00216	509	Gene3D	Cytochrome P450	23	497	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo6g00216	509	SUPERFAMILY	Cytochrome P450	29	499	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo6g00216	509	PANTHER	CYTOCHROME P450 93A3-LIKE	8	500	-	-
	Pumo6g00216	509	Pfam	Cytochrome P450	33	491	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo6g00216	509	PRINTS	E-class P450 group I signature	312	338	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo6g00216	509	PRINTS	E-class P450 group I signature	442	465	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo6g00216	Pumo-Chr6	2982850	2985203	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo6g00216	4	500	Cytochrome P450	AT5G07990	40.234	2.16e-122	366

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo6g00216	-		-	gmx:100814172	843.188

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