Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00214 ATGTCTCTACGACTAGGACAGATCCCAACCGTTGTGGTCTCGTCCTCAGAGGCTGCCAAGCAATTCCTCAAGACGCACGACGTCGTTTTCGCTAGTCGTCCTCGACATGAAGCCGCCATCTACGGCTCCAAAGGGGTGGCGTTGTCAGAATACGGTGCGTACTGGCGTAACATGAGGAAAGTGTGCACCTTACAACTTCTGAGCGCGTCAAAGGTTGAGTCCTTTGCGGCTACGAGGAAGAAGGAGCTGGAGAAGGCGGTGAAGTCACTCGAGAAAGCAGCAGGGGTGGGCGAGGTGGTGCACGACGTTGCAGAGGATTTTGTGTACAAAATGGTGTTGGGGCGTACCAAGAAGGATGCTGAGTTTGATTTGAAGGGGTTGATTCGAAACAAGATTAACCTTATTCGTGCGTTTAATGTAGCAGATTATGTGCCTTGGCTTGCCCCCTTCGATCTTCAGGGATTAAAACGAAGGTCCAAGAAAATTAGTAAAGCACTTGATCAAGTGTTGGAGAAGATAATTAAGGAGCATGAACACAGTTCAGATGTACAAAATGGACAACACCATAAGGATTTCATAGACATATTACTCTTGCTGATGCACCAACCCATGGATCCATATGATGAACAAAGCCATGTCATTGATCAAACTAATATTAAGGCTATACTCTTAGATATGATTGGTGGGGTATATGACACTACTGTAATGGTTGTGGAGTGGATATTATCTGAGCTCCTAAGGGATCCCAGAGTGATGAAAAACCTTCAAGATGAGCTAGATAAAGTAGTTGGAAGGAACAAATTGGTGGAGGAAAACGATTTGGCAAAGTTAAGTTACTTGGATATTGTGATCAAGGAGACCTTGAGATTATATCCTCCTGGACCATTAGTACCCCGAGAGTCAACAGAGGATGCTATGGTTCAGGGTTATTTCATAAAGAAAAAATCAAGAATCATCATAAACTTATGGGCAATAGGAAGAGATTATAAGATATGGTCTGATAATGCTGAAGTATTTTATCCAGAAAGATTCATTGACAACAATTTAGACTTTCGAGGACACGACCTCCAATTTATACCATTTAGTTTTGGTCGTAGAGGATGCCCTGGAATGCACTTAGGCTTAATTACGCAATTCCTCAAGACACACGACGTCGTTTTCGCTGGTCGTCCCATACTTGAAGCCGCCAACTACGGCTCTAAAGGGTTGGCACTGTCGGAGTACGGGGCGTACTGGCGTAACATAAGGAAAGTGTGTACCTCAGAACTTCTAAGTGCGTCCAAGGTTGAGTCCTTTGCGCCTTTGAGGAAGAAGGAGCTGGAATCAGCGGTGGAGTCGCTCAAGAGATCCGCAATGGTGGGCGAGGTCGTGGACCTTAGCGAGGTGGTGCACAACATTATTGAGGATTTTGTCTATATAATGGTGTTGGGGCGTACCAAGGATCATGAGTTTGATTTGAATTTAAAGGGTTTGATTCAAAATAAGAATAAACTTATTGGTGCGTTTAATATAGCAGATTATGTTCCTTGGCTGGGGGCTTTCGATCTTCAGGGATTAAAAGGAAGGTTCAAGAAAATTAATAAAGCACTTGACCAAGTGTTGGAGAAGATAATTCAGGAGCACGAACATGGTTCGAATGAACGATACCATAAGGACTTCATAGACATATTACTCTCATTGATACACTATCCAATCAATCCCTATGATGAACAAAACCATGTTATTGATCAAACCAACATCAAGGCTATACTCTTAGATATGATTGCTGGGGCATTTGACCCTTCTGCAACGGCTGTGGAGTGGGTGTTATCTGAGCTCCTAAGGCATCCTAAAGTGATGAAAAACCTTCAAGATGAGCTAGATAATGTGGTTGGAAGCAGCAAATTGGTGGAGGAAATTGATTTGGAAAAGTTAAGTTACTTGGATATTGTGATCAAGGAGACCTTGAGATTATATCCTCCTGGGCCATTAATCCCCCGAGAGTCAATTGAGGATGCTATTATTGAAGGTTATTTCATAGAAAAAAAGTCAAGAATCATCATAAATTTATGGGCAATAGGAAGAGATTCTAAGATATGGTCGGATAATGCTGAAGTATTTTATCCAGAGAGATTCATCAATAATAATTATGACTTTCGAGGACATGACTTTCAACTCATACCATTTGGTTATGGACGTAGGGGATGCCCTGGAATAAACTTAGGCTTAGTTATGGTTAAATTTGTTGTCGCTCAATTAGTTCATTGCTTTAATTGGGAACTTCCAGGAAGTATTGCCCCAAATGATTTGGACATGAGCGAGAAATTTGGCCTCACAATACCAAGAGTCAAGCACTTGCTTGTTGTGCCAAGGTATCGTCTTCTCAGGGAAGCCCATAGTGAACCAAATTGA 2391 0.4237 MSLRLGQIPTVVVSSSEAAKQFLKTHDVVFASRPRHEAAIYGSKGVALSEYGAYWRNMRKVCTLQLLSASKVESFAATRKKELEKAVKSLEKAAGVGEVVHDVAEDFVYKMVLGRTKKDAEFDLKGLIRNKINLIRAFNVADYVPWLAPFDLQGLKRRSKKISKALDQVLEKIIKEHEHSSDVQNGQHHKDFIDILLLLMHQPMDPYDEQSHVIDQTNIKAILLDMIGGVYDTTVMVVEWILSELLRDPRVMKNLQDELDKVVGRNKLVEENDLAKLSYLDIVIKETLRLYPPGPLVPRESTEDAMVQGYFIKKKSRIIINLWAIGRDYKIWSDNAEVFYPERFIDNNLDFRGHDLQFIPFSFGRRGCPGMHLGLITQFLKTHDVVFAGRPILEAANYGSKGLALSEYGAYWRNIRKVCTSELLSASKVESFAPLRKKELESAVESLKRSAMVGEVVDLSEVVHNIIEDFVYIMVLGRTKDHEFDLNLKGLIQNKNKLIGAFNIADYVPWLGAFDLQGLKGRFKKINKALDQVLEKIIQEHEHGSNERYHKDFIDILLSLIHYPINPYDEQNHVIDQTNIKAILLDMIAGAFDPSATAVEWVLSELLRHPKVMKNLQDELDNVVGSSKLVEEIDLEKLSYLDIVIKETLRLYPPGPLIPRESIEDAIIEGYFIEKKSRIIINLWAIGRDSKIWSDNAEVFYPERFINNNYDFRGHDFQLIPFGYGRRGCPGINLGLVMVKFVVAQLVHCFNWELPGSIAPNDLDMSEKFGLTIPRVKHLLVVPRYRLLREAHSEPN 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00214 796 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 361 370 IPR017972 GO:0005506|GO:0016705
Pumo6g00214 796 FunFam Uncharacterized protein 446 782 - -
Pumo6g00214 796 SUPERFAMILY Cytochrome P450 375 786 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 FunFam Cytochrome P450 83B1 1 378 - -
Pumo6g00214 796 Coils Coil 152 172 - -
Pumo6g00214 796 PRINTS P450 superfamily signature 643 654 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 PRINTS P450 superfamily signature 720 729 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 PRINTS P450 superfamily signature 590 607 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 722 731 IPR017972 GO:0005506|GO:0016705
Pumo6g00214 796 PRINTS E-class P450 group I signature 579 596 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 PRINTS E-class P450 group I signature 599 625 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 PRINTS E-class P450 group I signature 719 729 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 PRINTS E-class P450 group I signature 375 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 PRINTS E-class P450 group I signature 729 752 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 PRINTS E-class P450 group I signature 642 660 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 Coils Coil 252 272 - -
Pumo6g00214 796 SUPERFAMILY Cytochrome P450 2 380 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 Gene3D Cytochrome P450 378 788 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 CDD CYP71-like 378 779 - -
Pumo6g00214 796 Pfam Cytochrome P450 2 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 Pfam Cytochrome P450 378 778 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 Gene3D Cytochrome P450 1 377 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00214 796 PANTHER CYTOCHROME P450 93A3-LIKE 378 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00214 Pumo-Chr6 2931202 2979075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00214 378 788 Monolignol Biosynthesis Gene Families AT4G36220 38.551 4.75e-97 310