Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00207 ATGACCATATTTCAGCAATCCCCATCCTTCCCAGTAATTCCATTGTTCTTCTCTGTACTGTATCGAGTGATTTCGGGGAACACAGTGATGAATTCCCCACCTGTTGACAACAGTTCAGAACCTGGAGAGTTAGGCAGCCCAGATGCTAGTTCCAATGAAAATGGGAATTTTCTTTCCTTCTATGGTGAGGTGGAAGCCAAACATCGATTGCTTTTAGTTCAGTGGTTAACTAGTCTTGTCCCTTCGTTGAACCTTCCAATAAATGTCACGGATGGTGAATTAAGAGCATGCTTGAGCAATGGTACAGTTTTGTGCCAGATACTGAACAAGCTACGACCTGGTATCGTGATTGTGGTTAGTGAACCTGATAATTTTCTGCCATCACAATCAGAAAATGTTAAAACGTTTATGAAAGCTTTGGACGGAATGGGATTGCCCCGGTTTGAAATATCAGACCTAGAGAAGGGGTCTATGAAAGCTGTTGTGGATTGTCTTTTAATACTTAGAGAGAAAAGTTTGCAGAATGCTTTGGGAGATAATATTTCTGTAACTAATTCCAACACAGTGAGCCCTCGTGGGAGTACACCATTCAATTTTCATTGTTCTCCAACATTTGGTGGGGATCATAAGAAGGTTTCAGCTGGGTCAAAGTTGCATCGTGTTATGAGTACCCCAGTTATGGCGGAATCATCAGCTTCATTAATACACCATGTTGGTAATAAGTTCCATGAGGTGTTTCAACTGAAACCTGGGAGTTACGCAGATCTTCCTGCTGCAAAAATATCAGAAATGATGAAATCAAACAGTATAGATAATGCTCCCACTCAGTCGCTTCTCACTGTTGTGAATGGAATTCTTGAAGAAAGTGTTGAAAGAAGAAATGGGGAAATACCTCATCGTGTGGCTTGCTTGTTGAAAAAGGTTACTCAAGAGATTGAGCGGCGCATGTCAACTCAAGCAGAACATTTACGAACTCAAAACAATCTTTTTAAGGCTCGGGAAGAAAAATACCAATCAAGAATAAGAGTACTCGAGGCACTTGCCTCTGGAACTAGAGATGAGAGTGAGATATGTGCTAGCCAGTTTCAGCAGTTGAAGGGTGAGAAGATCAAAGAGGAAGGAAAAAAAGTAGATGAGAATGAAGTTGTTAGGTTGATAAAAGAGCAGGGGGACAAAAATTTGGAAATTTCAGCTTTGAAGATAAAACTGGAAACAGCCAAAAGAACATATGAAGTACAATTAGCACAGTTGGAAGAAGAAGCTAAGGGTGCTAAAGCAGAATTGACACAGGAGGCTCAAGAATATGAACATCAATTGGAAGAATTAAGAAATAAGGCTGAAAAGATAAAAGAGGAAGTAAAATCGCCAGATGAAGAGGAAATTGTTAGGTTGATGAAAGAACAAGAGGACAAAAATTTAGAAATTTCAGCTTTGAAGAGAGAACTGGAAACAGCCAAAAGAACATATGAAGTACATTTCTCACAGATGGAAGAAGAAGCTAAAGATGCTAAAGCAGAATTGACACAAAAGGCCCAAGAATATGAGCATCAATTGGAAGCATTAAGAAATAAGGTTGAAAAGATCAAAGAAGAGGTAAAAACGGCAGGTGAAGAGGAAATTGTTAGGTTGATGAAAGAACATGAAGACAAAAATTTGGAAATTTCAGCATTGAAGGAAGAATTGGAAACAACCAAAAAAACATATGAAGTACAATGTTCACAGTTAGAAACAGAAATTAAGGATGCTAAAGCAGAATTCACACAGAAGTCTCAAGAATATGAGCATCGATTGGAAGAATTTAGAAATAAGGCTGAGAAGATCAGAGAGGAAGAAAAGAAGGCAGATGAAAAAGAAATCATTAGGTTGATGAAAGAGCAGGAGGACAAAAACTTGGAAATTTCATCACTGAAGCAAGAACTGGAAACAACCAAAAAAACATATGAAGTACAATGCTCACAGTTGGAAGAAGCCAAGGGTGCTAAAGCAGAATTGGAACAAAAGTCTCGAGAATATATGCATCAATTGGAAGAATTAAGAAACAAGGTTAAGGAGCTTGAGGTTTCTTCTGATTCAAAAGATCAGAAGTGGAACATGAAAATGAAACAATTGCAGACTGTTATAACATTTCAATTCAGTTCCCTACAGAAATTGAAATTATCTTGGGAATCCATTAAGCAAAATGTTATGAAAGAGCAAACCGTTTATGCAGAGGATTGTGATCGATTAGGTGTTTTTCTTAAACCACTGCTACATGCAGCTGAGAACTACCATGTTGCTCTTGCTGAAAATCAAAAAATGTTTAATGAGATTCAAGAATTAAAAGGAAATATCAGAGTGTATTGTCGAATTAGACCATTTCTTTCAGGCAAAAAGGAAAAACAGTCTATTGTTGAACACATTGGTGAAAATGATTTGGTTGTGGTAAATCCATCCAAAGAAGGAAAAGATGCCCATCGATCATTTAAATTTAATAAGGTTTTCGGCCATGCCACAACTCAAGCGGAGGTATACTCTGACATCCAATCCTTTATAAGATCAGTACTGGATGGGTATAATGTGTGTATATTTGCTTATGGCCAAACTGGCGCAGGGAAAACTTATACAATGACTGGTCCAAATGGAGCAACAAGCGAGACTATTGGTGTTAATTATCGAGCTCTAAATGACCTCTTCAGGATTTCCACAAGTAGAGAAGGCTTCATTGACTATGAGATTGGGGTTCAAATGGTTGAGATATATAATGAGCAAGTCCGTGACTTGTTAATGATAGATGGTTCTCCAAAAAGACTTGGGATATTGACTCAATCTCAACCAAATGGCTTAGCAGTACCCGATGCTAGCTTGTTCCCTGTGAAAACGTCTTCAGATGTGATTAAGCTAATGGACATTGGACTTAAAAATAGAGCCATTGGTGCAACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTTGTCTCGATTCATGTTTGTGGGAAGGACTTGAAGACTGGTTCTACCATGGTTGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGTTCTGAAGTAACTGGGGATAGGCTTAAGGAAGCACAACATATAAACAAATCACTATCTGCCCTTGGAGATGTTATTTTTGCCCTTTCTCAAAAGAGCCCTCACGTACCATACAGAAACAGCAAGCTTACTCAACTTTTACAAACTTCTCTTGGTGGTCAAGCAAAGGCACTCATGTTTGTCCAAATTAATTCAGACATAAGTTCATATTCTGAAACTATGAGCACTTTAAAGTTTGCTGAGAGGGTTTCTGGAGTTGAATTAGGAGCTGCACGAAGTAGCAAAGAGAGCAAAGATGTCAGAGAATTAATGGAAAAGATGTCTTCTTTGAAGAACACTATTTTGGCAAAAGATGAGGAGATTGAGAGGCTTCAATTACTCAAAGGTTCAGTTGGTAGCATTGTTAAGCGAAACCAAATTCCACGAAGTAGAAGTATTAGGCACTTTGAAGCTGAAAAACGGAAACCAATGGATGATCATATACACCAAAATGAATTTCTCCATCAATCTGAACTTTATGGGGGAGATGTAGGAAAGAATATGGCTGCAATTGCAGAAACTTCGGGATTTACAGATTCTGATTTTGATGGAAGATCAAGTGATTTCTCTGACAGTGGTGTTGCTCCAGGCACAGAAACTGATGGTTCTGAAAATTCCAGTCTCACTGATGGCACAAAATCATCAGATAAGAGATCTAAAGCACTGCGCAAAACTGTTCAAGTGATGAGGAAATTAAGCCGAACCTCATCTATCACGCCCACCCCAGTAAAGGACCCCTTGAAGAAGTCATCAGGTATGTAA 3852 0.3866 MTIFQQSPSFPVIPLFFSVLYRVISGNTVMNSPPVDNSSEPGELGSPDASSNENGNFLSFYGEVEAKHRLLLVQWLTSLVPSLNLPINVTDGELRACLSNGTVLCQILNKLRPGIVIVVSEPDNFLPSQSENVKTFMKALDGMGLPRFEISDLEKGSMKAVVDCLLILREKSLQNALGDNISVTNSNTVSPRGSTPFNFHCSPTFGGDHKKVSAGSKLHRVMSTPVMAESSASLIHHVGNKFHEVFQLKPGSYADLPAAKISEMMKSNSIDNAPTQSLLTVVNGILEESVERRNGEIPHRVACLLKKVTQEIERRMSTQAEHLRTQNNLFKAREEKYQSRIRVLEALASGTRDESEICASQFQQLKGEKIKEEGKKVDENEVVRLIKEQGDKNLEISALKIKLETAKRTYEVQLAQLEEEAKGAKAELTQEAQEYEHQLEELRNKAEKIKEEVKSPDEEEIVRLMKEQEDKNLEISALKRELETAKRTYEVHFSQMEEEAKDAKAELTQKAQEYEHQLEALRNKVEKIKEEVKTAGEEEIVRLMKEHEDKNLEISALKEELETTKKTYEVQCSQLETEIKDAKAEFTQKSQEYEHRLEEFRNKAEKIREEEKKADEKEIIRLMKEQEDKNLEISSLKQELETTKKTYEVQCSQLEEAKGAKAELEQKSREYMHQLEELRNKVKELEVSSDSKDQKWNMKMKQLQTVITFQFSSLQKLKLSWESIKQNVMKEQTVYAEDCDRLGVFLKPLLHAAENYHVALAENQKMFNEIQELKGNIRVYCRIRPFLSGKKEKQSIVEHIGENDLVVVNPSKEGKDAHRSFKFNKVFGHATTQAEVYSDIQSFIRSVLDGYNVCIFAYGQTGAGKTYTMTGPNGATSETIGVNYRALNDLFRISTSREGFIDYEIGVQMVEIYNEQVRDLLMIDGSPKRLGILTQSQPNGLAVPDASLFPVKTSSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVCGKDLKTGSTMVGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSPHVPYRNSKLTQLLQTSLGGQAKALMFVQINSDISSYSETMSTLKFAERVSGVELGAARSSKESKDVRELMEKMSSLKNTILAKDEEIERLQLLKGSVGSIVKRNQIPRSRSIRHFEAEKRKPMDDHIHQNEFLHQSELYGGDVGKNMAAIAETSGFTDSDFDGRSSDFSDSGVAPGTETDGSENSSLTDGTKSSDKRSKALRKTVQVMRKLSRTSSITPTPVKDPLKKSSGM 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00207 1283 Coils Coil 619 695 - -
Pumo6g00207 1283 Pfam Kinesin motor domain 782 1101 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g00207 1283 SMART kinesin_4 774 1111 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g00207 1283 Gene3D - 455 497 - -
Pumo6g00207 1283 Gene3D - 378 418 - -
Pumo6g00207 1283 Gene3D - 614 655 - -
Pumo6g00207 1283 Gene3D - 535 576 - -
Pumo6g00207 1283 Coils Coil 1117 1144 - -
Pumo6g00207 1283 PANTHER KINESIN-LIKE PROTEIN KLP-3 600 1232 IPR027640 GO:0003777|GO:0007018
Pumo6g00207 1283 Coils Coil 400 459 - -
Pumo6g00207 1283 Gene3D - 61 174 IPR036872 -
Pumo6g00207 1283 SMART ch_5 68 168 IPR001715 GO:0005515
Pumo6g00207 1283 SUPERFAMILY Calponin-homology domain, CH-domain 67 169 IPR036872 -
Pumo6g00207 1283 MobiDBLite consensus disorder prediction 1221 1240 - -
Pumo6g00207 1283 MobiDBLite consensus disorder prediction 32 51 - -
Pumo6g00207 1283 Coils Coil 540 617 - -
Pumo6g00207 1283 ProSiteProfiles Kinesin motor domain profile. 776 1103 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g00207 1283 Gene3D Kinesin motor domain 720 1105 IPR036961 -
Pumo6g00207 1283 PRINTS Kinesin heavy chain signature 850 871 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g00207 1283 PRINTS Kinesin heavy chain signature 973 990 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g00207 1283 PRINTS Kinesin heavy chain signature 1004 1022 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g00207 1283 PRINTS Kinesin heavy chain signature 1053 1074 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g00207 1283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 776 1141 IPR027417 -
Pumo6g00207 1283 Coils Coil 461 538 - -
Pumo6g00207 1283 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 718 1105 - -
Pumo6g00207 1283 MobiDBLite consensus disorder prediction 1207 1283 - -
Pumo6g00207 1283 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 63 175 - -
Pumo6g00207 1283 MobiDBLite consensus disorder prediction 1259 1274 - -
Pumo6g00207 1283 Pfam Calponin homology (CH) domain 71 169 IPR001715 GO:0005515
Pumo6g00207 1283 ProSiteProfiles Calponin homology (CH) domain profile. 66 173 IPR001715 GO:0005515
Pumo6g00207 1283 FunFam Uncharacterized protein 614 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00207 Pumo-Chr6 2549276 2560302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00207 509 1103 Calmodulin-binding Proteins AT5G65930 30.934 1.38e-68 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00207 K10406 - gmx:100777268 1983.76