Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00193 ATGGATAAGATTGACAGAATCAGAGTGATGGCTAGATCGTCTCCATTTGACAAGCTTCTGATGGTTCAATGTTTAAAGCAGAAGGGTCATGTGGTGGCAGTCACAGGTGATGGCACAAATGATGCACCTGCTCTGAAAGAAGCTGATATTGGACTTTCTATGGGAATACAAGGCACTGAAGTGGCAAAGGAGAGCTCAGATATTGTTATCCTTGATGACAATTTCTCTTCTGTGGTCACAGTACTAAGGTGGGGAAGATGTGTGTACACAAACATTCAGAAGTTCATTCAGTTTCAGCTCACAGTTAATGTTGCTGCACTTGTCATCAACTTTGTAGCTGCAGTTTCTTCTGGTAAAGTGCCTCTTTCAGCTGTCCAGCTTTTGTGGGTAAACCTGATCATGGATACTCTTGGAGCTTTGGCCTTGGCCACTGAGCAACCCACTAATGATCTCATGAAGATGCCACCTGTAGGAAGAGTTGAGCCACTTATAACTAGAGTTATGTGGAGGAACCTCATTTCACAGGCACTGTATCAAGTGCTTGTCTTGCTGATTTTACAATTTAAGGGAAGATCAATCTTTGACGTCAGTGAGAAGGTGAAGAACACTCTTATTTTCAATGCTTTTGTCTTCTGCCAAGTCTTCAATGAGTTCAATGCAAGGAAGCTGGAGAAGAAGAACATCTTTGAGGGGCTTGGTAAAAATAAGTTGTTCATAGTAATTGTGGGCCTAACTGTGGTTCTTCAGCTAGTGATGGTTGAGTTTCTGAAGAAGTTTGCCAATACTGAGAGATTGACTTGGGAGCAATGGGGTGTTTGTGTTGGAATTGGAGCTTTGTCTTGGCCAATTGGTCTGCTGGTGAAGTGTATCCCAGTTGGTCCCAACAAGTAG 891 0.4287 MDKIDRIRVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFSSVVTVLRWGRCVYTNIQKFIQFQLTVNVAALVINFVAAVSSGKVPLSAVQLLWVNLIMDTLGALALATEQPTNDLMKMPPVGRVEPLITRVMWRNLISQALYQVLVLLILQFKGRSIFDVSEKVKNTLIFNAFVFCQVFNEFNARKLEKKNIFEGLGKNKLFIVIVGLTVVLQLVMVEFLKKFANTERLTWEQWGVCVGIGALSWPIGLLVKCIPVGPNK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00193 296 Gene3D - 47 291 - -
Pumo6g00193 296 SUPERFAMILY HAD-like 6 84 IPR036412 -
Pumo6g00193 296 NCBIfam HAD-IC family P-type ATPase 6 116 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo6g00193 296 Pfam Cation transporting ATPase, C-terminus 120 289 IPR006068 -
Pumo6g00193 296 PRINTS P-type cation-transporting ATPase superfamily signature 59 71 - -
Pumo6g00193 296 PRINTS P-type cation-transporting ATPase superfamily signature 35 54 - -
Pumo6g00193 296 FunFam Calcium-transporting ATPase 52 294 - -
Pumo6g00193 296 SUPERFAMILY Calcium ATPase, transmembrane domain M 85 291 IPR023298 -
Pumo6g00193 296 PRINTS H+-transporting ATPase (proton pump) signature 35 51 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo6g00193 296 PRINTS H+-transporting ATPase (proton pump) signature 67 92 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo6g00193 296 PANTHER CATION TRANSPORTING ATPASE 1 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00193 Pumo-Chr6 2345166 2346056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00193 1 292 Primary Pumps ATPases AT3G22910 81.164 2.20e-164 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00193 K01537 - gmx:100784119 571.622