Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00185 ATGGCGGCAAAACGGTTTTTGGATGATTCTGATCAAGACACTAATAAGCCAGGCGATAAACGGATCAGAACTACACCAAGACCTTCTTTTGCTTCGGTAATAGGAGAAGTCGTCATGGTGAAAAACTTGCAGAACCTTTTCTCAGGCTTGGAGCCCTTGCTTAGGAAAGTGGTGAATGAAGAGGTGGAGCGAGTGATGAGGCATTGCGTTCCACGTTCAATAACAAGGTCCCCTTCGTTGAGGATCCAAGCATTGGAGCAAGCATCAAGCTATGAACTGATGTTCAACAAGAAGCTATTGCCCCCTACTATATTCACTGGGAGCAGGGTAGTGGACATAGATGGGAACCCCATCCACGTGATTCTCGTTGACAAAAGCGGTGGCCAAGCGGTTCCCACAAGTCTTCCCCACCCCATAAAGTTAGAAATCGTGGTGCTTTATGGAGATTTTCCTCCTAACAACGAGTCATGGACGAGTGAGCAATTCAACAACCACATAGTGAAGGAGAGAACGGGGAAGAGGCCATTGCTCACTGGAGAATTGAATCTGACCCTGAGGGATGGGATTGCACCAATTGAAGACATTGAGTTCACTGATAACTCCAGTTGGATACGAAGCAGAAAGTTCAGAGTTGCTGTTAGACTGGCTCCTGGGAGTAATCAAACTCTACGAATTCGTGAAGGAATGACTGAGCCATTTGTTGTTAAGGATCACCGTGGTGAATTGTACAAGAAACATCACCCACCTATGCTCCACGACGAAGTGTGGCGCCTAGAGAAGATTGGGAAAGACGGAGCTTTCCACAAAAAATTGTCCAAAGAGGGGATAAACAGCGTACAAGACTTTCTCAAGTTATCCGTTGTTGATGTCTATAGGCTCAGAAAGATTTTGGGCGTTGGGATGTCAGAGAAAATGTGGGATGTGACAATCAAGCATGCAAAGACTTGCGAGAAGGGCAACAGATACTACGTCTACCGCGGGCCTAATTTTACCATCTTTCTGAATTCCATATGCCAGTTGATTAGAGCTGATATCGACGGCCAAAGTTTTCCGGGCAGAGAGCTAAGCAACTTGACCAGGAGCTATATGGAGAAATTGGTGAGAGAAGCATATGCTAGATGGAATGACTTGGAGGAAATTGATCCGGCTTTGTTAACCCAAGGTGAAACTTTGGAGCAATTTCCAAACAATCATCAAGCATCACTAATAGCATATGATCAGATCGACTATTTTGGTGATAAATCTGCAGAAGCTGGTAACTATGTACCAAGCCATAATGCACAAATTGGGTGCAGTGAGTGGGGAGTGAATGCAACATTTGGGACAACACCATTCGCGGATGGTATACCATACAGCTTCTCAGATTCACAATCGGACAGTGACATAACTCCCTCAGTTGATGGTGCTGCAAGGTGGCATTAG 1422 0.4543 MAAKRFLDDSDQDTNKPGDKRIRTTPRPSFASVIGEVVMVKNLQNLFSGLEPLLRKVVNEEVERVMRHCVPRSITRSPSLRIQALEQASSYELMFNKKLLPPTIFTGSRVVDIDGNPIHVILVDKSGGQAVPTSLPHPIKLEIVVLYGDFPPNNESWTSEQFNNHIVKERTGKRPLLTGELNLTLRDGIAPIEDIEFTDNSSWIRSRKFRVAVRLAPGSNQTLRIREGMTEPFVVKDHRGELYKKHHPPMLHDEVWRLEKIGKDGAFHKKLSKEGINSVQDFLKLSVVDVYRLRKILGVGMSEKMWDVTIKHAKTCEKGNRYYVYRGPNFTIFLNSICQLIRADIDGQSFPGRELSNLTRSYMEKLVREAYARWNDLEEIDPALLTQGETLEQFPNNHQASLIAYDQIDYFGDKSAEAGNYVPSHNAQIGCSEWGVNATFGTTPFADGIPYSFSDSQSDSDITPSVDGAARWH 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00185 473 Pfam Calmodulin binding protein C-terminal domain 322 380 IPR046829 -
Pumo6g00185 473 Pfam Calmodulin binding protein-like N-terminal domain 91 238 IPR046831 -
Pumo6g00185 473 PANTHER OS02G0177800 PROTEIN 1 419 IPR012416 GO:0005516
Pumo6g00185 473 MobiDBLite consensus disorder prediction 1 26 - -
Pumo6g00185 473 Pfam Calmodulin binding protein central domain 250 316 IPR046830 -
Pumo6g00185 473 MobiDBLite consensus disorder prediction 453 473 - -
Pumo6g00185 473 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00185 Pumo-Chr6 2274556 2279017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00185 3 381 Calmodulin-binding Proteins AT5G57580 48.571 5.65e-114 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00185 - - gmx:100802257 830.861