Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00157 ATGGTGAGACCACATACGAATACGAACCCCATGACATGCAAGAAGAGGTGGCGAATGGCTTTGACCGCCATCTCCTTCGTAAAGGCCCTTCACCATCTCTCCAAGAAAGCTCTTCGCATAAACACCCCAACCCTCTTGCGCTCATTCTCCTACCTCGCCATCGACGTTGCTCCAGAACACGTGCACTCCCCACGTGCCAAACCCTTCGACGTTGATGCCAAGCTTCTCAGCGACATGAGCTCCAAGGGGCAGGTGTATGAAAATCTTGAAGAGTCAGGACTGACATTGTTGGGGATACTTGGGTTGAAAGACCCTTGTAGGCCAGGAGTTGAAGCTGCAGTTGAATCCTGCAAGAATGCTGGAGTGAAGATCAAGATGATCACAGGAGATAATGTGCACACAGCAAGGGCCATAGCCTCTGAATGTGGGATTCTTGACCCTAATGAAGAATTGGACGAAGAAGCAGTGGTTGAAGGATTTCAATTCAGAAATTACTCGCATGAGGAAAGAATGGATAAGATTGACAGAATCAGAGTGATGGCTAGATCGTCTCCATTTGACAAGCTTCTGATGGTTCAATGTTTAAAGCAGAAGGGTCATGTGGTGGCAGTCACAGGTGATGGGACAAATGATGCACCTGCTCTAAAAGAAGCCGATATTGGACTTTCTATGGGAATACAAGGCACTGAAGTGGCAAAGGAGAGCTCAGATATTGTTATCCTTGATGACAATTTCTCTTCTGTGGTCACAGTACTACGGTGGGGAAGATGTGTGTACACAAATATTCAGAAGTTCATTCAGTTTCAGCTCACAGTTAACGTGGCTGCACTTGTCATAAACTTTGTAGCTGCAGTTTCTTCTGGTAAAGTGCCTCTTTCAGCTGTCCAGCTTTTGTGGGTAAACCTGATCATGGATACTCTTGGAGCTTTGGCCTTGGCCACTGAGCAACCCACCAATGATCTCATGAAGATGTCACCTGTAGGTAGAGTTGAACCACTAATAGCCAGAGTTATGTGGAGGAACCTCATTTCACAGGCATTGTATCAAGTGCTTGTGTTGCTGATTTTACAATTCAAGGGAAGATCAATCTTTGATGTCAATGAGAAGGTGAAGAACACTATGATTTTCAATGCTTTTGTCCTCTGCCAAGTCTTCAATGAGTTCAACGCAAGGAAGCTGGAGAAGAAGAACATCTTTGAGGGGCTTGGTAAAAACAAGTTGTTCATAGTAATTGTGGGCCTAACTGTGGTTCTTCAGCTAGTGATGGTTGAGTTTCTGAAGAAGTTTGCCAATACTGAGAGATTGACTTGGGAGCAATGGGGTGTTTGTGTTGGAATTGGAGCTTTGTCTTGGCCAATTGGTCTGCTGGTGAAGTGTATCCCAGTTGTTCGCAACAAGTAA 1401 0.4525 MVRPHTNTNPMTCKKRWRMALTAISFVKALHHLSKKALRINTPTLLRSFSYLAIDVAPEHVHSPRAKPFDVDAKLLSDMSSKGQVYENLEESGLTLLGILGLKDPCRPGVEAAVESCKNAGVKIKMITGDNVHTARAIASECGILDPNEELDEEAVVEGFQFRNYSHEERMDKIDRIRVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFSSVVTVLRWGRCVYTNIQKFIQFQLTVNVAALVINFVAAVSSGKVPLSAVQLLWVNLIMDTLGALALATEQPTNDLMKMSPVGRVEPLIARVMWRNLISQALYQVLVLLILQFKGRSIFDVNEKVKNTMIFNAFVLCQVFNEFNARKLEKKNIFEGLGKNKLFIVIVGLTVVLQLVMVEFLKKFANTERLTWEQWGVCVGIGALSWPIGLLVKCIPVVRNK 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00157 466 Pfam haloacid dehalogenase-like hydrolase 95 219 - -
Pumo6g00157 466 PRINTS H+-transporting ATPase (proton pump) signature 237 262 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo6g00157 466 PRINTS H+-transporting ATPase (proton pump) signature 205 221 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo6g00157 466 PRINTS H+-transporting ATPase (proton pump) signature 82 100 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo6g00157 466 SUPERFAMILY HAD-like 95 310 IPR036412 -
Pumo6g00157 466 Gene3D - 106 250 IPR023214 -
Pumo6g00157 466 PANTHER CATION TRANSPORTING ATPASE 83 462 - -
Pumo6g00157 466 NCBIfam calcium-translocating P-type ATPase, PMCA-type 87 462 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pumo6g00157 466 Gene3D - 251 451 - -
Pumo6g00157 466 Gene3D - 86 105 IPR023299 GO:0000166
Pumo6g00157 466 NCBIfam HAD-IC family P-type ATPase 176 286 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo6g00157 466 PRINTS P-type cation-transporting ATPase superfamily signature 205 224 - -
Pumo6g00157 466 PRINTS P-type cation-transporting ATPase superfamily signature 98 109 - -
Pumo6g00157 466 PRINTS P-type cation-transporting ATPase superfamily signature 229 241 - -
Pumo6g00157 466 PRINTS P-type cation-transporting ATPase superfamily signature 120 130 - -
Pumo6g00157 466 Pfam Cation transporting ATPase, C-terminus 290 459 IPR006068 -
Pumo6g00157 466 FunFam Calcium-transporting ATPase 222 464 - -
Pumo6g00157 466 FunFam Calcium-transporting ATPase 100 250 - -
Pumo6g00157 466 SUPERFAMILY Calcium ATPase, transmembrane domain M 255 464 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00157 Pumo-Chr6 1844133 1847138 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00157 89 462 Primary Pumps ATPases AT3G63380 76.738 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00157 K01537 - gmx:100784119 711.449