Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00129 ATGGCTGCCACCGAACGCAGACTAAGCTTGGAACCCGAGAAAAAGAGCCTTCTCAGACACCACACCGAGAAGCACTTCACCGCCGGCGAAATCGTCCGCGACATCATCATCGGTGTTTCCGACGGCCTCACCGTCCCCTTCGCCCTCGCCGCCGGACTCTCCGGCGCCAATGCCACCTCCTCCATCGTTCTCACCGCCGGCATAGCCGAAGTCGCCGCCGGCGCCATCTCCATGGGTCTCGGCGGTTATTTGGCAGCAAAAAGTGAAACTGATCACTACGCTAGAGAATTGAAAAGAGAGCAAGAAGAAATCATCGCCGTCCCAGATACTGAAGCTGCGGAGGTAGCAGAAATACTGGCTCAGTATGGGATAGAGGCACATGAATATTCACCTGTGGTGAATGCTCTCAGAAAAAACCCTCAAGCATGGCTTGATTTCATGATGAAATTTGAGCTGGGACTAGAGAAGCCAGATCCAAGGAGAGCATTGCATAGTGCAATGACAATTGCCATTGCTTACATATTGGGTGGGCTTGTTCCTCTCGTTCCTTACATGTTCATTCCAAGGGCAGCAGAGGCAGTTTTGTTTTCCGTTGTGGTTACCTTGGTTGCATTGCTGATTTTTGGCTATGCTAAGGGGCACTTCACGGGCAATAAACCTTTCAGGAGTGCTTTGGAAACAACTCTAATAGGTGCCATCGCCTCTGCAGCTGCTTTTGGTATGGCAAAGGCTTTCAATCCATAG 744 0.5121 MAATERRLSLEPEKKSLLRHHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKSETDHYARELKREQEEIIAVPDTEAAEVAEILAQYGIEAHEYSPVVNALRKNPQAWLDFMMKFELGLEKPDPRRALHSAMTIAIAYILGGLVPLVPYMFIPRAAEAVLFSVVVTLVALLIFGYAKGHFTGNKPFRSALETTLIGAIASAAAFGMAKAFNP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00129 247 Pfam VIT family 32 242 IPR008217 GO:0005384|GO:0030026
Pumo6g00129 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 17 245 IPR008217 GO:0005384|GO:0030026
Pumo6g00129 247 CDD CCC1 11 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00129 Pumo-Chr6 1492286 1494811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00129 1 243 Nodulin-like Gene Family AT3G43660 24.898 9.29e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00129 K22736 - gmx:100793585 438.343