Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00128 ATGGGAGGAATAGGAAAAACAGCAATCGCTAGTCAAATATATCACAAATTGGCAGTGCAATTCGATTCCAGCAGCCTCGTTTTGAATGGTAAAATAGAAATAGAAAGACATGGAATACAGCATACAAGAAGCAAATATTTATCAGAACTTCTAGAGGAAGACAAGACATCCTATAGATTACGTTATTTCACTGATAGGCTCAAACGGAAAAAGGTTCTCCTTATTCTTGATGATGTGAACAATTCAGGTCATCTAAAAGATTTAATTGGAGGGCGTGGTGATTTTGGCCAGGGCAGTAGAATCATTGTGACCAGTAGAGACTTGCATGTGCTTAAGAATGCTGAAGCTGATGAACTCTATGAAGTTAAGGAGATGAATTTTCAAGATTCTCTAAAACTGTTCAGTGTAAATGCTTTTAAACAAAACCATCCAAGAGAAACTTATATGGACTTATCAGTAAAGGTATTGAATTATGCCAAAGGGATTCCATTAGCTCTCAAGGTTTTGGGCTCATTGCTTTATGGCAGAACAAGGGAAGCATGGGAAAGTGAGTTGCAAAAGTTGGAAAGACTTCCCGATCTTGAAATTTTCAATATATTAAAAGTAAGTTATGATGGGCTGGACGAGGAGCAGAAGGATATATTTCTTGACATTGCTTGCTTTTATAGAGGTCATGAGGAGAATGTCGTGGCACAAACACTGGGTAGCTGTGGTTTCTACGCCAACATTGGAATGAGTGTTCTCAGAGATAGGTGCCTAATATCTATTTTGGACGGTAGAATTGTGATGCATGATCTGATAAAAGAAATGGGACAAGAAATTGTTCGTCGAGAATGTGTTAATAATCCTGGAAAACGCAGTCGATTGTGGAAGGTTGAGGAAATTTATCATGTTTTAAGAAAGAATAAGGGGTCAGATGCAATTCAGTGTATATTGCTAGACGTATGCAAAATCAAAAAAGTTGAACTACATGCTGAAACTTTCAAAAAGATGGACAATCTGAGGATGCTCCAGTTCTATAAGTCCTCTGGCTATTGGAATAATGTGTTGCTTCTATCATCTCTTGAAAGTCTTCCGGATAGTTTAAAAATTCTTCATTGGGATGACTTCCCTCAGAGATCTTTGCCGCAGAACTTTTGCCCAGAAAGTCTTGTGAGACTCGAAATGCGACATTGCCATCTTGAACATCTTTGGGAACGAGATCAGTATTTACCGAATTTGAAAAGGCTGGACCTGAGTTATTCTCGGAAACTAATTCGAATACCGGACCTCTGTCTGTCACCAAATATTGAAGAAATGATTCTGAGTGGTTGTGTAAGCTTGATTCAAGTTTACTCCTCAGAATTCCTCAGAAAGCTAAATTGTTTATGTTTAAACGGTTGTGTTGAGCTTAGGAGTTTAACTATTCCGAGCAATATTTTATCGAGGTCATCAGGATTAATATTTCTTTCCAAATGTCTCAAGCTTGAAACGTTTTCAATCGGTAATAGATCCGAAGTGGTTCAGAGAGGAATACGACAACCTAATACTCGTTCCTTATATAGAGGAAAAGGATGGTATTTTTTGGAATATTCCTCAGATGATTGGGACATCTCGGTATTTGAAAATTGTTGTTTTGTGGAATCTTCCCCAGATACTTTTGACCCCGTTGACGTTGTGAATATTGACAGACATGAAGAAGAAGAGGCGAATAATATAGGCTTACAGACGGTAGACCTTGAAATGCAGATAAAAGGTGTATCCTCAATATTTCCAAGTCCGAATGAGTTGTGTTGGTTAGATCTCTCTAATTGTAAATCCCTTACAAGCCTTCCATTTGAGTTTGACCTTTCTAAGTTGAAATTCCTAAAGAAACTTCTTCTCTGCGGTTGCTCAAATTTGGAAATTTTCCCGGAAATTGAGGACACATTGGAAAATCTAGCGGTGCTCATCTTAGACCAAACAGCAATACGGGCATTACCTTCATCCTTGTGCCGTTTGGTGGGGCTTGAAGAATTGAGCCTTCACAGCTGCGCGAATCTTGAGATTATTCTATCTTCCATTGGAAATCTCAGCAAGCTCTACAAGTTAGGCCTTGCCTACTGTAAATCACTTGAAACTTTTCCGAGCAGCATTTTCAAATTGAAGTCGACAAAACTTGATTTGCGTGGTTGCTCAATGCTGAGGACCTTCCCAGAGATCTTGGAGTCTGCAGAAACTTTTGCTCACATTAACTTAACAGAAACGGCTATTAAAGAACTGCCTTCATCATTGGGCAATTTGGTTCGGCTTCGTACCCTGTGTCTGAACATGTGCAGAGATCTCGAGTCACTTCCAAACAGCATTGTTTATCTAAACCTTCTCTCTAAACTTGATTGTTCGGGATGTGCCAAATTAACAGAAATCCCAAGTGATATAGGTCGCTTGTCATTATTAAGGGAACTGTCACTGAATGAGAGCATAATTGAGAACCTTCCTGAGAGCATTGCTCATCTTTCAAGCTTGAAATTACTTGATTTAAGTGATTGCAAAAAGCTTGAATGCATCCCACAGCTTCCACCATTTCTAGAACAATTATTGGCATTTGACTGCCCATCCATTAGAAGAGTGATGTCAAATTCAAATTCACTTATTCAAATCCCATCAAATTCCAAAGAGGGTGTATTCGGGTTTTATTTCACCAATGGTCAACAACTGGATCAAGGTGCTCGTGCTAATATTGTGGATGATGCATGGCATAGGATGACCGAGGATGCATATAGGTCAGTGTTCTTTTGTTTTCCAGGGAGTGCAGTTCCTCGTTGGTTCCCTTTTCGTGGCAAGGGACATTCAGTAACTATAAATACAGATTCTCTAAATTTTTGCAGTGATGATAGGCTCATTGGTTTTGCTTTGTGTGTCGTTTTGGAACTGTTAGATATGAATGATGTTGAAGGTAGATATGGTTCTTTTAGGTACAGCCTAAAATTTGAATCTGATGATGGCATACAGATTCTTCCCAACAATGATGAGTTAAGAAACTATTTCCATTGGAAGGGTCGAGAGAGAGTAATTGATCAAGATCACACATTTCTGTGGAAATATAACTTGGAATCTACAAGGATCAGCGGCATGAGCCGTATGCTCTGTCATGCTCGCAGCTTCACTTTTGAGATCAGCCCATTTGATTATGGCTTTCAGCCGCGACATTTCATATCAATTGTCAGAGAGTTCAAATCAATTGTCACAGTAAAAGAATGCGGACTATGCCCTCTTTATACCAAAGAAAAAGATTATAATAATGCTGGTGCTGGTGACAATTCTGGCATTCTTAGATTTTCAAAAGATGACATTGAAGAACCTAGTGGAAGCAATGTTGCATAG 3342 0.389 MGGIGKTAIASQIYHKLAVQFDSSSLVLNGKIEIERHGIQHTRSKYLSELLEEDKTSYRLRYFTDRLKRKKVLLILDDVNNSGHLKDLIGGRGDFGQGSRIIVTSRDLHVLKNAEADELYEVKEMNFQDSLKLFSVNAFKQNHPRETYMDLSVKVLNYAKGIPLALKVLGSLLYGRTREAWESELQKLERLPDLEIFNILKVSYDGLDEEQKDIFLDIACFYRGHEENVVAQTLGSCGFYANIGMSVLRDRCLISILDGRIVMHDLIKEMGQEIVRRECVNNPGKRSRLWKVEEIYHVLRKNKGSDAIQCILLDVCKIKKVELHAETFKKMDNLRMLQFYKSSGYWNNVLLLSSLESLPDSLKILHWDDFPQRSLPQNFCPESLVRLEMRHCHLEHLWERDQYLPNLKRLDLSYSRKLIRIPDLCLSPNIEEMILSGCVSLIQVYSSEFLRKLNCLCLNGCVELRSLTIPSNILSRSSGLIFLSKCLKLETFSIGNRSEVVQRGIRQPNTRSLYRGKGWYFLEYSSDDWDISVFENCCFVESSPDTFDPVDVVNIDRHEEEEANNIGLQTVDLEMQIKGVSSIFPSPNELCWLDLSNCKSLTSLPFEFDLSKLKFLKKLLLCGCSNLEIFPEIEDTLENLAVLILDQTAIRALPSSLCRLVGLEELSLHSCANLEIILSSIGNLSKLYKLGLAYCKSLETFPSSIFKLKSTKLDLRGCSMLRTFPEILESAETFAHINLTETAIKELPSSLGNLVRLRTLCLNMCRDLESLPNSIVYLNLLSKLDCSGCAKLTEIPSDIGRLSLLRELSLNESIIENLPESIAHLSSLKLLDLSDCKKLECIPQLPPFLEQLLAFDCPSIRRVMSNSNSLIQIPSNSKEGVFGFYFTNGQQLDQGARANIVDDAWHRMTEDAYRSVFFCFPGSAVPRWFPFRGKGHSVTINTDSLNFCSDDRLIGFALCVVLELLDMNDVEGRYGSFRYSLKFESDDGIQILPNNDELRNYFHWKGRERVIDQDHTFLWKYNLESTRISGMSRMLCHARSFTFEISPFDYGFQPRHFISIVREFKSIVTVKECGLCPLYTKEKDYNNAGAGDNSGILRFSKDDIEEPSGSNVA 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00128 1113 Pfam C-JID domain 920 1082 IPR045344 -
Pumo6g00128 1113 Gene3D Ribonuclease Inhibitor 560 711 IPR032675 -
Pumo6g00128 1113 Gene3D - 1 119 IPR027417 -
Pumo6g00128 1113 Pfam NB-ARC domain 1 190 IPR002182 GO:0043531
Pumo6g00128 1113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 218 IPR027417 -
Pumo6g00128 1113 PRINTS Disease resistance protein signature 402 418 - -
Pumo6g00128 1113 PRINTS Disease resistance protein signature 66 80 - -
Pumo6g00128 1113 PRINTS Disease resistance protein signature 159 173 - -
Pumo6g00128 1113 Gene3D - 125 208 IPR042197 -
Pumo6g00128 1113 SUPERFAMILY L domain-like 262 846 - -
Pumo6g00128 1113 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 474 IPR044974 GO:0006952
Pumo6g00128 1113 Gene3D Ribonuclease Inhibitor 712 878 IPR032675 -
Pumo6g00128 1113 Gene3D Ribonuclease Inhibitor 292 508 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00128 Pumo-Chr6 1483887 1487768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00128 630 838 WRKY Transcription Factor Family AT4G12020 34.928 1.15e-18 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00128 - - ccaj:109803335 1340.48