Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00126 ATGGGAGGAATAGGAAAAACTACAATTGCTAGGCAAATATATCACAAATTGGCATTGCAGTTCGGTTCCAGCATCCTCATTTTAAACGTTCAAGAAGAAATAGAAAGACATGGAATATGCCATATAAGAAGCCAATATTTATTAGAGCTTCAATATGAAAGGCTCAAACGGACAAAGGTTCTCCTCATTCTTGATGATGTTAACGATTCAGCTCAACTAACAGATTTAATTGGAGGGCGTGGTAATTTTGGCCAGGGCAGTAGAATTCATTGTGACCATCAGAGACAAGCAGGTGCTTAA 300 0.3833 MGGIGKTTIARQIYHKLALQFGSSILILNVQEEIERHGICHIRSQYLLELQYERLKRTKVLLILDDVNDSAQLTDLIGGRGNFGQGSRIHCDHQRQAGA 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00126 99 Gene3D - 1 90 IPR027417 -
Pumo6g00126 99 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 90 IPR044974 GO:0006952
Pumo6g00126 99 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 89 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00126 Pumo-Chr6 1449940 1450853 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00126 3 89 WRKY Transcription Factor Family AT4G12020 35.577 1.23e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00126 - - gmx:100814075 136.346