Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00123 ATGTCGGGGAGTTCTTCTTCAGCTGTTGTGTCCTCTCCTCTAATTAGGCATGATGTGTTCCTCAACTTTAGAGGGGAAGACACCCGTTACAACTTCATTAGTCACCTTTATGCAGAACTAGACAGGAAAAAGATCGAAACATATATAGATTATAGACTAGACAGGGGTGAAGAGATTTCACCTGCACTGCACAAAGCAATAGAAGAATCAATGATTTATGTTCTCGTTTTCTCCAAAGACTATGCATCTTCCACATGGTGTTTGGATGAACTCACAAAGATACTCGATTGCAAGAAGAGATATGGAAGGGATGTCATACCAGTTTTCTATAAGGTGGATCCATCAACTGTTAGAAATCAGAGAGAAAGATATGCAGAAGCATTTGTTAAGCATGAACAGCGATTTAAGGACAACATGGACAAAGACAAAGTGCATGCATGGAAGGCTGCTCTAACTGAAGCAGCTGGACTCTCGGGCTGGGATTCACAAGTCATCAGACCAGAACACACACTTGTTGAAGAAATTGTGGAAGATATTTTGAGAAAATTGAATCGTTCTTCCATGAGTGATCATCAAGGAATTATTGGAGTTGAAAACCATATTGCACGAATCCAGTCCTTGTTGCAGCTTGAGTCACTGGATATTCGGATCATAGGAATTTGGGGCATGGGAGGAATAGGAAAAACTACAATTGCTAGGCAAATATATCACAAATTAGCATTGCAGTTCGGTTCCAGCATCCTCGTTTTAAACGTTCAAGAAGAAATAGAAAGACATGGAATAGAGCATATAATAAGCAAATATTCATCAGAGCTTCTAGAGGAATACAACACAATCTATGAATTAAGTTTTATATACGAAAGGCTCAAACGTAAAAAGGTTCTCCTTATTCTTGATGATTTGAACAATTCTGGTCATCTAAAAGATTTAATTGGAGGGCGTGGTAATTTGGGCCAGGGCAGTAGAATCATTGTGACCAGCAGAGACATGCAGGTGCTTAAGAATGCTGAAGCTGATGAAATCTATGAAGTTAAGGAGATGAATTTTCAAGATTCTCTAAAACTTTTCAGTATACATGCTTTTAAACAAAACCGTCCAAGAGAAACTTACATGGATTTGTCAGTAAAGGTGTTGGATTATGCTAAAGGGATTCCACTAGCTCTCCAGATTTTGGGCTCGTTGCTTTATGGTAGAACAAAGGAAGCATGGGAAAGTGAGTTGCAAAAGTTGGAAAAGCTTCCCGATCCTAAAATTTTCAATGTATTAAAATTAAGCTATGATGGTCTTGACGAGGAGGAGAAGGATATATTTCTTGACATAGCTTGCTTTTACAGAGGTCATGAGGAGATTGTCGTGGCACAAACGCTAGATAGCTGTGGTTTCTCTGCTAACATTGGAATGGATGTTCTCAAAGATAGGTGCCTAATATCTATTTTGGAAGGTAGAATTGTGATGCATGATTTAATACAAGAAATGGGACAAGAAATTGTTCGTCGACAATGTGGCCATAATCCAGGAAAACGCAGTCGATTGTGGAAGGTTCGGGAAATTTATCAAGTTTTAAGAAAAAACAAGGGGACAGATGCAGTACAGTGTATATTGCTCGACATATGCAAAATCGAAAAAGTTAAACTACATTCTAAAACTTTCGAAAAGATGGACAATCTGAGGATGCTCCACTTCTACAAGTCTCGTGGCTATTGGTATGAATCAAATGTATTTCTTGCATCATCTCTTGAAAGTCTTCCGGATGGTCTAAAAATTCTTCGTTGGGATGGCTTCCCTCAAAGATCTTTGCCGCCCAACTTTTGCCCAGAAAATCTAGTGAGACTCGAAATGCGACATTGCCATCTTAAACAACTTTGGGAAGGAGATCAGTATTTACCGAATTTGAAAAGGCTGGACCTGAGTTATTCTCCGGAACTAATTCGAATACCGGACCTTTATCTGTCACCAAATATTGAAGAAATAATTCTCAGTGATTGTGAAAAGTTGATTCAAGTTTACTCCTCAGGATTCCTCAGCAAGCTCAAATGTTTGTGTTTAAATGGTTGTGCTGTGCTTAGGAGTTTCACTATTCCGAGCAATATTCTATCGAGATCACCAGGATTAATTCTTCTTTCCAATTGTCTCAATCTTGAAACGTTTTCAATCAGTAAAAGTCAATCATTATTAATCAGCCATCGCTCAAGCTTCCGTCGAAGATCTCGAATCATTGGCAAAGCTGCCCCAAGACTCCCGGATTCTAATGAAATTTTCTCAATTACTTTTGACAGATACGAGGATGAAGAAGAAGAAGAAGCAGAGAATAATGTAGACTCAGAATACTCTAAAGTGTTGGGAGAACTCAGAGAAGGTGTGTCCTCAATATTTTCAAGTCCGAATGAGTTGTGTTGGTTAGATCTCTCTTGTTGTGAATCCCTTACAAGCCTTCCATTTGAGTTTGACCTTTCTAAGTTGAAATTCCTAAAGAAACTTTCTCTCCGTCGTTGCTCAAATTTGAAAAAATTCCCCGAAATCGAGGACACAATGGAAAATCTAGCGGTGCTCATCTTAGACAGAACAGCAATACAGGCACTACCTTCATCCTTGTGCCGTTTGGTGGGGCTTGAAGAATTGAGCTTGCACAACTGCACTAGCCTTGAGATTATTCCCTCTTCCATTGGAAATCTCGGCAAACTCTGCAAGTTAGATCTTACCTACTGTAAATCACTTCAAACTTTTCCGAGCAGCATTTTCAAATTGAAGTTAAGGAAACTTGATTTGCATGGTTGCTCAATGCTGAGGACCTTCCCAGAGATCTTGGAGCCTGCAGAAACTTTTGCTCACATTAGATTAACAGAAACGGCTATTAAAGAACTTCCTTCATCATTTGGCAATTTGGTTCGGCTTCGAAGCCTGCGTCTGGACATGTGCAGTGATCTCGAGTCTCTTCCAAACAGCATTGTTAATCTAAACCTTCTCTCTAAACTTGATTGTTCAGGATGTGGCAAATTAACAGAAATCCCACGTGACATTGGTCGTCTGTCATTATTAATGGAACTGTCACTGAGTGAGAGCGGAATTGTGAACCTTCCAGAGAGCATTGCTCATCTTTCAAGCTTGAAATCACTTGATTTAAGTGATTGCAAAAGGCTTGAATGCATCCCACAGCTTCCACCATTTCTAAAACAATTAGTGGCATTGGATTGCCCATCCATTACAAGAGTGATGTCAAATTCACTTATTCAAATTCCGTCAAATTCCAAAGAGGGTGTCTTCAAAATTCATTTCACCAATGCTAAACAATTGGATCCAGATGCTCATGCTAATATTATGGATGATGCAAGGCTGAGGATGACCGAGGATGCATATAGGTCTGTGTTCTTTTGTTTTCCAGGGAGTGCTGTTCCTCATTGGTTCCCTTTTCGTGGCAAGGGATATTCAGTAACTACAAATACAGATTCTCTAAATTTTTGCAGTGATGATAGGCTCATTGGTTTCGCTTTGTGTGTCGTTTTCGAACTATCAGATACGAATGTCAAACTATCATATACGAATGATGATGTTCGTAGATATGGTTGTTTTAGTTACAGCCTAAAATTTGAATCTGATGACGGCATACACATTCTTCCCAACAATCAGGAGTTAAGAAACTATTTCGATTGGAAGGGTCGAGACAGAGTAATTGATCAAGATCACACATTTCTGTGGAAATATAACATGGAAACTGCAAGGATCAGCGGCATGAGCCGTATGCTCTGTCATGCTCGCAGCTTCACTTTTGAGATCAGCCCATTTGGTTATGACATTCAGTGGCAAGATTTCAAATCAATTGTCAGAGAGTTCAAATCAGTTGTCACAAGAGCAGATTTTTGGAATGACAGAATCAAGCTTTCTGACTTGCATCATCCAAATGTGGTAGCATTCTATGGTGTTGTGCTTGATGGCCCCGGAGGTTCTGTGGCAACAGTAACGATGTATGTGGTTAATGGTTCTCTAAGAAATGCCTTGGAGAAGAATGGGAGAAGTCTTGACAAGCACAAGCGTCTTTTGATTGCGATGGATGTGGCTTTTGGTATGGAGTACCTGCATGGAAAAAACATAGTACACTTTGACTTGAAGAGTCACAATTTGCTTGTGAATCTCCAAGATCCACACCACCCAATATGCAAGAGTTTGAAAGATGAGATAGAGAAGCTTAAACATGATAAAGAACAACTTCTAAGGGAGTTAGAGAGGCATGAACAGGAGTGGAAAATGTATGAGATACAATTACAATACTCAAAGGATCGTTTGGAAAAGAAGCAAGAAGATATGCTTTCTTCTGTTTCTCAAGTGTTGCAGAAACCCGGGGTTGCCGTAAATCTCTTGCAACTGACAAAAAACATGGATAGAAAACAGAGGTTGCCGAGAAGTGATGACGCTAGCATTGAAGATCATGTGGAAACTTCCCCAGTATTATCAAGGTAA 4452 0.396 MSGSSSSAVVSSPLIRHDVFLNFRGEDTRYNFISHLYAELDRKKIETYIDYRLDRGEEISPALHKAIEESMIYVLVFSKDYASSTWCLDELTKILDCKKRYGRDVIPVFYKVDPSTVRNQRERYAEAFVKHEQRFKDNMDKDKVHAWKAALTEAAGLSGWDSQVIRPEHTLVEEIVEDILRKLNRSSMSDHQGIIGVENHIARIQSLLQLESLDIRIIGIWGMGGIGKTTIARQIYHKLALQFGSSILVLNVQEEIERHGIEHIISKYSSELLEEYNTIYELSFIYERLKRKKVLLILDDLNNSGHLKDLIGGRGNLGQGSRIIVTSRDMQVLKNAEADEIYEVKEMNFQDSLKLFSIHAFKQNRPRETYMDLSVKVLDYAKGIPLALQILGSLLYGRTKEAWESELQKLEKLPDPKIFNVLKLSYDGLDEEEKDIFLDIACFYRGHEEIVVAQTLDSCGFSANIGMDVLKDRCLISILEGRIVMHDLIQEMGQEIVRRQCGHNPGKRSRLWKVREIYQVLRKNKGTDAVQCILLDICKIEKVKLHSKTFEKMDNLRMLHFYKSRGYWYESNVFLASSLESLPDGLKILRWDGFPQRSLPPNFCPENLVRLEMRHCHLKQLWEGDQYLPNLKRLDLSYSPELIRIPDLYLSPNIEEIILSDCEKLIQVYSSGFLSKLKCLCLNGCAVLRSFTIPSNILSRSPGLILLSNCLNLETFSISKSQSLLISHRSSFRRRSRIIGKAAPRLPDSNEIFSITFDRYEDEEEEEAENNVDSEYSKVLGELREGVSSIFSSPNELCWLDLSCCESLTSLPFEFDLSKLKFLKKLSLRRCSNLKKFPEIEDTMENLAVLILDRTAIQALPSSLCRLVGLEELSLHNCTSLEIIPSSIGNLGKLCKLDLTYCKSLQTFPSSIFKLKLRKLDLHGCSMLRTFPEILEPAETFAHIRLTETAIKELPSSFGNLVRLRSLRLDMCSDLESLPNSIVNLNLLSKLDCSGCGKLTEIPRDIGRLSLLMELSLSESGIVNLPESIAHLSSLKSLDLSDCKRLECIPQLPPFLKQLVALDCPSITRVMSNSLIQIPSNSKEGVFKIHFTNAKQLDPDAHANIMDDARLRMTEDAYRSVFFCFPGSAVPHWFPFRGKGYSVTTNTDSLNFCSDDRLIGFALCVVFELSDTNVKLSYTNDDVRRYGCFSYSLKFESDDGIHILPNNQELRNYFDWKGRDRVIDQDHTFLWKYNMETARISGMSRMLCHARSFTFEISPFGYDIQWQDFKSIVREFKSVVTRADFWNDRIKLSDLHHPNVVAFYGVVLDGPGGSVATVTMYVVNGSLRNALEKNGRSLDKHKRLLIAMDVAFGMEYLHGKNIVHFDLKSHNLLVNLQDPHHPICKSLKDEIEKLKHDKEQLLRELERHEQEWKMYEIQLQYSKDRLEKKQEDMLSSVSQVLQKPGVAVNLLQLTKNMDRKQRLPRSDDASIEDHVETSPVLSR 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00123 1483 ProSiteProfiles Protein kinase domain profile. 1233 1483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00123 1483 Gene3D - 15 185 IPR035897 -
Pumo6g00123 1483 MobiDBLite consensus disorder prediction 1459 1483 - -
Pumo6g00123 1483 SUPERFAMILY L domain-like 484 838 - -
Pumo6g00123 1483 Gene3D - 346 430 IPR042197 -
Pumo6g00123 1483 SMART till_3 16 157 IPR000157 GO:0007165
Pumo6g00123 1483 Gene3D Transferase(Phosphotransferase) domain 1 1266 1388 - -
Pumo6g00123 1483 SUPERFAMILY L domain-like 786 1071 - -
Pumo6g00123 1483 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 185 - -
Pumo6g00123 1483 Pfam C-JID domain 1125 1230 IPR045344 -
Pumo6g00123 1483 Gene3D - 186 344 IPR027417 -
Pumo6g00123 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 440 IPR027417 -
Pumo6g00123 1483 MobiDBLite consensus disorder prediction 1459 1474 - -
Pumo6g00123 1483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1362 1374 IPR008271 GO:0004672|GO:0006468
Pumo6g00123 1483 Coils Coil 1384 1418 - -
Pumo6g00123 1483 Gene3D Ribonuclease Inhibitor 523 743 IPR032675 -
Pumo6g00123 1483 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 160 IPR035897 -
Pumo6g00123 1483 Gene3D Ribonuclease Inhibitor 780 915 IPR032675 -
Pumo6g00123 1483 Pfam NB-ARC domain 198 412 IPR002182 GO:0043531
Pumo6g00123 1483 PRINTS Disease resistance protein signature 381 395 - -
Pumo6g00123 1483 PRINTS Disease resistance protein signature 1030 1046 - -
Pumo6g00123 1483 PRINTS Disease resistance protein signature 217 232 - -
Pumo6g00123 1483 PRINTS Disease resistance protein signature 288 302 - -
Pumo6g00123 1483 Pfam TIR domain 17 191 IPR000157 GO:0007165
Pumo6g00123 1483 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Pumo6g00123 1483 Pfam Protein tyrosine and serine/threonine kinase 1280 1377 IPR001245 GO:0004672|GO:0006468
Pumo6g00123 1483 SUPERFAMILY Protein kinase-like (PK-like) 1274 1375 IPR011009 -
Pumo6g00123 1483 SMART serkin_6 1266 1481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00123 1483 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 724 IPR044974 GO:0006952
Pumo6g00123 1483 Gene3D Ribonuclease Inhibitor 916 1078 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00123 Pumo-Chr6 1433031 1442896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00123 17 716 WRKY Transcription Factor Family AT4G12020 34.218 3.51e-97 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pumo6g00123 NB-ARC 1.1e-29 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00123 - - ccaj:109803335 1699.1