Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00114 ATGGTGAAGCATGCACTGGTTTTTGGAGGTTCTTTATTTTTTAATCTTGTTTTGGTTCTTTCTTTCCTTGTTGTCTTAGCTAGATGTCAAGATGCAGAGGTAATGGGAATTTTGAAGAACATGATCAATGCCCCCATTAGCTTCCAATGGACAGGCCCAGATGTATGCAAATGGAGGCACGTTATATGTGATTCATATAAACGTGTGACAGCAATTCAGATTGGGAACCAAAACCTTCAGGGTTCTCTCCCTAAGGAGCTTGTGAAGCTGACAGCGTTGGAACGTTTTGAGTGTCAAAGCAATAGTTTCACAGGGCCATTCCCCTACCTCTCAAAATCCTTACAAAAGTTGGTAATCCATGACAACAAGTTCAGCTTTATTCCCAACGATTTCTTCAAGGGTATGAGCAATTTACAAGAGGTGAGAATTGATGACAACCCATTTTCTCAATGGCACATTCCTGACACTCTTAGGGATTGTGTTGCACTCCAAACTTTCAGTGCACAAAGTGCTGGCCTTGTGGGCACGATCCCGGACCTTTTTGGCAGAGATGGTCCATTCCCAGGTTTGGTTCTCTTGGCCTTGTCTGATAATTTTCTAGAAGGTGCATTGCCTGCAAGCCTCTCAGGTAGTTCAATAGAAAACCTTTTGGTGAATGGACAAAATAGCATCTCTAAACTCAATGGCACCCTTGTCGTGTTACATACCATGAAATCTTTGAGGCAGATTTGGGCTAATGGGAATTCATTCACTGGTCCTATACCAGACTTGTCACATCATGATCAACTTTCTTATGTGAATTTAAGGGATAACCAGTTAACTGGTGTTGTTCCTCCCTCTCTAATTGCTCTCCCAAGCCTGAAGTTTGTGAACTTAACCAATAATTTTCTCCAAGGTTCCCCTCCCAGGTTCAAAAATGGGGTAGGAGTTGACAATAACATGGATAAGGGGAGAAATCAATATTGCACAAATGTGCCGGGGCAGCCTTGTAGTCCCCTTGTAAATGCTTTACTACCTGTTGCTGAACATTTGGGTTATCCTCTAAAGTTTGCTCAAAGTTGGCAGGGTAATGATCCATGTGCTAATAAATGGATAGGTATAGTTTGCTCTGGGGGAAACATTTCGGTTATCAACTTTCAAAACATGGGTTTGTCTGGCACTATTTGTCCATGTTTTGCCAGCTTTACATCTGTGACAAAGTTACTTCTTGCTAACAATGGTCTCACTGGTACCATACCAAATGAACTTACTAGTTTGCCTTTTTTGCAAGAGTTGGATGTTTCCAATAATCATCTATATGGCAAAGTGCCGCCATTCCATAAAGGCGTGGTTCTTAAACTAAGTGGGAATCCTGATATTGGTAAGGATAAACCAACTAGCTCAGGTTCCAAAGCCAATGGTAGCAATCATACTACGGTAATTGTTGGAATTATGGTAGTAGTGGTTATTGTACTTATTTTCGGGGTTATAATACATGTTAAGTTCAAGAGAAAATGGAAGCATTCGGGGAAAGCTCAAAATCCAACTACAATTCTGGTACCTCCTCACCATTATGGGGATGGGAATGCTGTGAAAATAAGTGGTGGAGGTTATGGGGAAGGAACTACTAGTGCATTATTAAGTCCCACATGTAGTGTTTATCAAGTAGAAGCTCGTAACATGTTAATTTCAGTTCAAGTTTTGAAAGAAGTTACCAATAATTTTAGTGAAGAAAACATATTGGGGAAAGGGGGGTTTGGCACTGTATACAAAGGAGAGTTGCATGATGGAACAAAGATTGCAGTGAAAAGGATGCAATCAGCAGGATTGGTGGATGAGAAAGGACTGAGTGAGTTCACAGCCGAAATTGCAGTGCTTACTAAGGTTCGACATAGAAATTTGGTTGCACTCTTGGGGTTTTGCTTGGATGGAAGTGAAAGACTTCTTGTGTATGAATACATGCCTCAAGGTGCTCTAAGTAAACATTTGATTAATTGGAAAAATGAAGGGCTAAAACCACTTGAATGGAAAACAAGGCTTAGTATTGCCTTGGATGTTGCTAGAGGTGTTGAATATCTTCATGGTTTGGCGCAACAAATTTTTATCCATAGGGATCTCAAACCATCCAACATTTTGCTTGGAGATGATATGCGTGCCAAAGTATCAGATTTTGGATTAGTTCGACTTGCTCCTGAAGGGAAAACCTCATTTCAAACTAGACTTGCAGGAACTTTTGGATATATGGCACCAGAGTATGCAGCCACGGGACGACTTACAACAAAGGTTGATGTATATAGTTTTGGAGTGATTCTTATGGAAATGATAACTGGAAGGAAAGCACTTGACAACAGCCTACCAGAAGAGAACATCCACCTTGTTACATGGTTTCGTAAGATGCTACTGAACAAAGATTCATTTCGAACAACCATTGACCCAACAATTGAAGTTGATGAGGAAACTTTAACCAGTATTAATACCGTTGCAGAGTTAGCAGGGCACTGTTGTGCAAGGGAACCTTATCAGCGTCCTGACATGAGTCATGTAGTGAATGTGTTATCACCTCTTGTTGAGGTGTGGAAGCCTTCAGAAATAAATGTTGATGATATATATGGAATTGACTTTGATATGACATTACCAGAAGCACTCCAAAGGTGGAAGGCTTTTGAAGGAAGTAGCACCACCCTAGAATTAACATCTCCTTCTTTGTCAATGCATCTTAATGGAAACAACACAAAGTCAAGCACACAAACTCACCCATTTGCAGTTGGAGGTCCCTTTACATCTTCAAATGCACGATGA 2778 0.4071 MVKHALVFGGSLFFNLVLVLSFLVVLARCQDAEVMGILKNMINAPISFQWTGPDVCKWRHVICDSYKRVTAIQIGNQNLQGSLPKELVKLTALERFECQSNSFTGPFPYLSKSLQKLVIHDNKFSFIPNDFFKGMSNLQEVRIDDNPFSQWHIPDTLRDCVALQTFSAQSAGLVGTIPDLFGRDGPFPGLVLLALSDNFLEGALPASLSGSSIENLLVNGQNSISKLNGTLVVLHTMKSLRQIWANGNSFTGPIPDLSHHDQLSYVNLRDNQLTGVVPPSLIALPSLKFVNLTNNFLQGSPPRFKNGVGVDNNMDKGRNQYCTNVPGQPCSPLVNALLPVAEHLGYPLKFAQSWQGNDPCANKWIGIVCSGGNISVINFQNMGLSGTICPCFASFTSVTKLLLANNGLTGTIPNELTSLPFLQELDVSNNHLYGKVPPFHKGVVLKLSGNPDIGKDKPTSSGSKANGSNHTTVIVGIMVVVVIVLIFGVIIHVKFKRKWKHSGKAQNPTTILVPPHHYGDGNAVKISGGGYGEGTTSALLSPTCSVYQVEARNMLISVQVLKEVTNNFSEENILGKGGFGTVYKGELHDGTKIAVKRMQSAGLVDEKGLSEFTAEIAVLTKVRHRNLVALLGFCLDGSERLLVYEYMPQGALSKHLINWKNEGLKPLEWKTRLSIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGKTSFQTRLAGTFGYMAPEYAATGRLTTKVDVYSFGVILMEMITGRKALDNSLPEENIHLVTWFRKMLLNKDSFRTTIDPTIEVDEETLTSINTVAELAGHCCAREPYQRPDMSHVVNVLSPLVEVWKPSEINVDDIYGIDFDMTLPEALQRWKAFEGSSTTLELTSPSLSMHLNGNNTKSSTQTHPFAVGGPFTSSNAR 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00114 925 Gene3D Phosphorylase Kinase; domain 1 536 646 - -
Pumo6g00114 925 PANTHER OSJNBA0070M12.3 PROTEIN 15 911 - -
Pumo6g00114 925 SUPERFAMILY Protein kinase-like (PK-like) 548 845 IPR011009 -
Pumo6g00114 925 CDD STKc_IRAK 574 848 - -
Pumo6g00114 925 Pfam Leucine rich repeat N-terminal domain 38 64 IPR013210 -
Pumo6g00114 925 Pfam Leucine rich repeat N-terminal domain 335 370 IPR013210 -
Pumo6g00114 925 MobiDBLite consensus disorder prediction 892 925 - -
Pumo6g00114 925 FunFam receptor protein kinase TMK1 647 864 - -
Pumo6g00114 925 Pfam Protein kinase domain 569 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00114 925 ProSitePatterns Protein kinases ATP-binding region signature. 574 596 IPR017441 GO:0005524
Pumo6g00114 925 SUPERFAMILY L domain-like 336 442 - -
Pumo6g00114 925 SUPERFAMILY L domain-like 34 306 - -
Pumo6g00114 925 Gene3D Ribonuclease Inhibitor 29 328 IPR032675 -
Pumo6g00114 925 Gene3D Ribonuclease Inhibitor 333 457 IPR032675 -
Pumo6g00114 925 FunFam receptor protein kinase TMK1 531 646 - -
Pumo6g00114 925 Gene3D Transferase(Phosphotransferase) domain 1 647 862 - -
Pumo6g00114 925 FunFam Receptor-like kinase TMK4 29 327 - -
Pumo6g00114 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Pumo6g00114 925 SMART serkin_6 568 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00114 925 ProSiteProfiles Protein kinase domain profile. 568 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00114 925 FunFam Leucine-rich repeat receptor-like kinase 332 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00114 Pumo-Chr6 1277783 1281085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00114 69 845 Receptor kinase-like Gene Family AT5G07280 31.522 6.46e-82 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pumo6g00114 Pkinase 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00114 K00924 - gmx:100788903 1538.47