Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00072 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCCAATCAATCAGAAGATGCACAAGGGGCTACTGCATCAAAGAGCAACAAGTCCAGTGATGGTTCATCTTCATCCACTGCCCCTAAGAAGCTTTCCAATTGGTTGAATTCAGTTTCTAATAGGCAGAGTCCCAGTCCTCCATCTCCCAACCTGGCTAGAGGAGAAAGAATGGAGCCATCTGATTCAGTGAGCATTGGTGGTTTGGATGTTGTGTCTGATTCAGCGAGGCGTGATTTGGAGTCAAGCACTTCGAGGGATCCTGAAGTGGAAGAGGAGTATCAGATACAACTGGCTTTGGAGCTGAGTGCAAAAGAGGATCCTGAGGCTGTACAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCTTGTGACCCTGATAATACACCAGCTGAAGTTGTGGCCTACCGTTACTGGAATTACAATGCTCTTGGTTATGATGACAAAATCTCAGATGGTTTCTATGATCTATATGGGATCTTGACTGAGTCAACCTCTGCAAGAATGCCTTCACTTGTAGATCTGCAAGGAACACCAATCTCAGGTGATGTCACATGGGAAGCAGTCTTGGTCAATAGGGCTGCTGATTCCAATTTGTTGAAACTTGAACAAAAAGCCATGGAGATGGCTGTCAATTCAAGAAAAGATTTTGAAGTAGTTGTAGATAGTAATTTGGTACACAAGCTTGCAATAATAGTGGCTGACTATATGGGTGGATCAGTTGAAGATCCTGAAAGCATGTCAAGAGCATGGAGGAGTCTTAGTTACAGTCTAAAAGCAACCCTTGGTAGCATGGTTTTGCCACTTGGTTCACTGACCATTGGATTGGCTCGGCATCGTGCATTGTTATTCAAGGTTTTAGCTGACAGTTTGGGCATCCCGTGTCGATTGGTGAAAGGACTGCAGTATATGGGTTCCAATGATGTGGCAATGAACTTTGTCAAGATTGATGATGGAAGGGAGTACATTGTTGACCTAATGGCAGCTCCTGGAACACTTATTCCTTCTGATGCCACTGGATCACTCATTGAGTGTGAATCTTCCTATGTAGCCAGTCCTTCATCAAGAGAGCTTGATTCGTCTCATGTAGCATCGTTCAGCAGTGGGGTCGGAAGTTCATCTGAAGAAGCTTCAGACTCTGGGACTCTGGATAAAGATAATAAATCAAAGCATTTTGGCTATGCAGAGAAAGAATCCGATGTAAGCGGGCCTACTACAGGCAAGGAAGAATTGAAGAAACCATCAAATGAATCCAAAAATACCCCCTATGAGGAGAAGATCATAGTGCGGGAATCCCCAAACAGATCTAATTATCCATATATGCATGGAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTGCGTAGAATGAAAGTCAAAGATGTTTCCCAATATATGATTGATGCTGCTAAGGAGAACCCTAACTTGGCTCAAAAACTTCATGATGTTTTGCTTGAAAGTGGTGTTGTTGCACCTCCAAACTTATTTTCTGAAATTTATCATGGGCAATTAGCTACCCCAACTGAGGCCAATTTTCCAACTGAACAAAAAGATGGAAATAATCAAGGAAGTGTGCAGCAAGAAACTAAGACTGATGACAATCTAGTTCCTGCTCGATTTTTGCCTCCTTTGCCTCACCACCGAGTTCATCGCAAAGCACCTCCTAGCACTAGCAGTCAGCTGGAGCATTCTAAGCCTGTTGATGGCTTAGGAATTGGCCTTCCTCTTGATACATGGGAAGCTGCTGGACAGCACATATCCTCTCAGGCTGAAGCAACTCAGGTAAAGTATGGGAAAAATGTCCCAGTTGCAGCAGCTGCAGCTGCTGCTGCTGCTGTTGTTGCATCTTCTATGGTAGTTGCTGTAACGAAGTCAAATGCTGACTCGAATCTTGAGATTCCTGTAGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTTGTAGCAACCACTGCTGCTGTTAGTAAGCAGTATGAGCAGGGCAGTCGAAGTGATGGTGATTCAGAGGGTGCTGGTTATGAGCCGAAGGGTAGTGGTGATGGAGAGCATAATCCTTTAGGAGAAAACTCAGAAGGCGAGAGAAAATCTGATAGATCAGTAAGTAATGACAGCACAAAATCTGATTCAGCGCTAGATGATGTTGCTGAGTATGATATTCCATGGGAGGAAATCGTGGTGGGAGAGCGTATTGGACTTGGATCATATGGGGAAGTTTACCGTGGTGAATGGCATGGAACTGAAGTTGCTGTAAAAAAGTTTCTTTATCAAGATATCTCCGGTGAATTACTTGAAGAATTCAAAAGTGAGGTCCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACTCGACCTCCAAATCTTTCAATTGTTTCTGAATTTCTTCCTAGAGGGAGTTTGTATAGATTAATTCACCGACCTAACAATCAATTAGATGAGCGAAGGCGGTTGCGAATAGCCCTTGATGCTGCTCGAGGAATGAACTATCTGCACAACTGCACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAATCTTCTCGTTGACAAAAACTGGGTTGTAAAGGTATGTGATTTTGGCTTATCACGAATGAAGCATAGTACATTCCTTTCTTCCAGATCAACGGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGATGTTTTTAGCTATGGGGTCATATTATGGGAGCTCTCTACTTTGCAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTAGTTGGTGCCGTGGGTTTCCAACATCGCCGTCTTGACATTCCAGATAATGTAGACCCTGCCATTGCAGATATTATCAGACAATGCTGGCAGACTGATCCAAAGTTGAGACCCACATTTGCTGAAATCATGGCTGCTCTGAAGCCATTGCAGAAGCCAATTACTGCTTCTCAAGTGCATAGACCAAGTGCTCAGTCATCACGAGTTGCTGAAGACCCTACAGGATAG 3051 0.4395 MKNILKKLHIMSNQSEDAQGATASKSNKSSDGSSSSTAPKKLSNWLNSVSNRQSPSPPSPNLARGERMEPSDSVSIGGLDVVSDSARRDLESSTSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGILTESTSARMPSLVDLQGTPISGDVTWEAVLVNRAADSNLLKLEQKAMEMAVNSRKDFEVVVDSNLVHKLAIIVADYMGGSVEDPESMSRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGLQYMGSNDVAMNFVKIDDGREYIVDLMAAPGTLIPSDATGSLIECESSYVASPSSRELDSSHVASFSSGVGSSSEEASDSGTLDKDNKSKHFGYAEKESDVSGPTTGKEELKKPSNESKNTPYEEKIIVRESPNRSNYPYMHGRSPSWTEGISSPAVRRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEIYHGQLATPTEANFPTEQKDGNNQGSVQQETKTDDNLVPARFLPPLPHHRVHRKAPPSTSSQLEHSKPVDGLGIGLPLDTWEAAGQHISSQAEATQVKYGKNVPVAAAAAAAAAVVASSMVVAVTKSNADSNLEIPVAAAATATAAAVVATTAAVSKQYEQGSRSDGDSEGAGYEPKGSGDGEHNPLGENSEGERKSDRSVSNDSTKSDSALDDVAEYDIPWEEIVVGERIGLGSYGEVYRGEWHGTEVAVKKFLYQDISGELLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVSEFLPRGSLYRLIHRPNNQLDERRRLRIALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDNVDPAIADIIRQCWQTDPKLRPTFAEIMAALKPLQKPITASQVHRPSAQSSRVAEDPTG 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00072 1016 PRINTS Tyrosine kinase catalytic domain signature 896 906 IPR001245 GO:0004672|GO:0006468
Pumo6g00072 1016 PRINTS Tyrosine kinase catalytic domain signature 849 867 IPR001245 GO:0004672|GO:0006468
Pumo6g00072 1016 PRINTS Tyrosine kinase catalytic domain signature 959 981 IPR001245 GO:0004672|GO:0006468
Pumo6g00072 1016 PRINTS Tyrosine kinase catalytic domain signature 810 823 IPR001245 GO:0004672|GO:0006468
Pumo6g00072 1016 PRINTS Tyrosine kinase catalytic domain signature 915 937 IPR001245 GO:0004672|GO:0006468
Pumo6g00072 1016 Pfam Protein tyrosine and serine/threonine kinase 737 988 IPR001245 GO:0004672|GO:0006468
Pumo6g00072 1016 MobiDBLite consensus disorder prediction 997 1016 - -
Pumo6g00072 1016 SUPERFAMILY Protein kinase-like (PK-like) 720 987 IPR011009 -
Pumo6g00072 1016 MobiDBLite consensus disorder prediction 995 1016 - -
Pumo6g00072 1016 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 85 997 - -
Pumo6g00072 1016 MobiDBLite consensus disorder prediction 8 60 - -
Pumo6g00072 1016 MobiDBLite consensus disorder prediction 372 437 - -
Pumo6g00072 1016 MobiDBLite consensus disorder prediction 84 102 - -
Pumo6g00072 1016 MobiDBLite consensus disorder prediction 372 388 - -
Pumo6g00072 1016 ProSiteProfiles Protein kinase domain profile. 736 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00072 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 855 867 IPR008271 GO:0004672|GO:0006468
Pumo6g00072 1016 ProSitePatterns Protein kinases ATP-binding region signature. 742 764 IPR017441 GO:0005524
Pumo6g00072 1016 MobiDBLite consensus disorder prediction 1 102 - -
Pumo6g00072 1016 SMART serkin_6 736 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00072 1016 MobiDBLite consensus disorder prediction 522 578 - -
Pumo6g00072 1016 FunFam Serine/threonine-protein kinase isoform 1 727 814 - -
Pumo6g00072 1016 Gene3D Transferase(Phosphotransferase) domain 1 815 1000 - -
Pumo6g00072 1016 MobiDBLite consensus disorder prediction 698 714 - -
Pumo6g00072 1016 CDD STKc_MAP3K-like 742 988 - -
Pumo6g00072 1016 Gene3D Phosphorylase Kinase; domain 1 729 813 - -
Pumo6g00072 1016 Pfam Ethylene-responsive protein kinase Le-CTR1 141 344 - -
Pumo6g00072 1016 MobiDBLite consensus disorder prediction 389 437 - -
Pumo6g00072 1016 FunFam Serine/threonine-protein kinase CTR1 815 998 - -
Pumo6g00072 1016 MobiDBLite consensus disorder prediction 669 723 - -
Pumo6g00072 1016 MobiDBLite consensus disorder prediction 522 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00072 Pumo-Chr6 770424 794175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00072 1 1008 MAP Kinase Kinase Kinase AT1G73660 63.557 0.0 1162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pumo6g00072 PK_Tyr_Ser-Thr 3.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00072 - - gmx:100778331 1815.82