Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00059 ATGCTCTTCCTTACCTATAATTTGCTTAGGGTTAGAGGGAAGAGACGAAAAATGGTAAAATCAACATATGAAAGATTTTCAAAGGATTTTGTAATGGGAGGAGTAGCAGCAATAATATCAAAGACTGCAGCGGCACCAATTGAGAGAGTGAAGCTTTTATTGCAAAACCAAGGTGAAATGATTAAAAGAGGGCAACTCAAAAAACCATACTTGGGCGTCTCTGATGGCTTTAAGAGGGTCTTCATGGAAGAGGGTTTGATTGCCTTTTGGAGAGGTCACCAGGCCAATGTTATCCGATATCTCCCCACACAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGGTATTCCAAAGAGAGAGACGGGTACATTAAGTGGTTTACTGGGAATGTGGCTTCAGGCAGTGCTGCAGGAGCGACTACTTCGGTGCTTCTGTATCATTTAGATTATGCACGTACACGACTGGGCACTGATGCAATAGAGTGCCGTGTTACCAGTCAACGCCAGTTTAAAGGACTAATTGATGTATACCGGAAGACCTTATCAAGTGATGGAATTGCCGGGTTGTACAGGGGATTTGGGATTTCAATATGGGGAATCACCATGTATCGAGGGATGTACTTTGGGATCTATGACACCATGAAGCCTATTGTTTTAGTTGGGCCTTTTGAGGGGAACTTTCTTGCTAGTTTCTTCTTAGGTTGGAGCATCACAACTTTTTCAGGTGTTTGTGCATACCCTTTTGACACGTTGCGCCGGCGAATGATGCTTACCTCTGGACATCCAAACAAGTACTGTAATGCAATACATGCATTTCGTGAGATTGTTCGACAAGAGGGTTTCATAGCTCTATTTCGAGGAGTTACTGCAAATATGCTTCTTGGTGTGGCAGGAGCTGGGGTGCTCGCTGGATACGATCAGCTGAACCATATCTCATCTAGACACAGTCACTATAATGAGACAAACCAAAGAGTTTTGAAATGA 996 0.4287 MLFLTYNLLRVRGKRRKMVKSTYERFSKDFVMGGVAAIISKTAAAPIERVKLLLQNQGEMIKRGQLKKPYLGVSDGFKRVFMEEGLIAFWRGHQANVIRYLPTQAFNFAFKGYFKSIFGYSKERDGYIKWFTGNVASGSAAGATTSVLLYHLDYARTRLGTDAIECRVTSQRQFKGLIDVYRKTLSSDGIAGLYRGFGISIWGITMYRGMYFGIYDTMKPIVLVGPFEGNFLASFFLGWSITTFSGVCAYPFDTLRRRMMLTSGHPNKYCNAIHAFREIVRQEGFIALFRGVTANMLLGVAGAGVLAGYDQLNHISSRHSHYNETNQRVLK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00059 331 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 20 319 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo6g00059 331 Gene3D Mitochondrial carrier domain 27 321 IPR023395 -
Pumo6g00059 331 PRINTS Adenine nucleotide translocator signature 103 115 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo6g00059 331 PRINTS Adenine nucleotide translocator signature 129 142 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo6g00059 331 PRINTS Adenine nucleotide translocator signature 26 38 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo6g00059 331 PRINTS Adenine nucleotide translocator signature 70 91 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo6g00059 331 PRINTS Adenine nucleotide translocator signature 234 250 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pumo6g00059 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 221 IPR018108 -
Pumo6g00059 331 SUPERFAMILY Mitochondrial carrier 25 312 IPR023395 -
Pumo6g00059 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 24 117 IPR018108 -
Pumo6g00059 331 PRINTS Mitochondrial carrier protein signature 194 212 IPR002067 GO:0055085
Pumo6g00059 331 PRINTS Mitochondrial carrier protein signature 29 42 IPR002067 GO:0055085
Pumo6g00059 331 PRINTS Mitochondrial carrier protein signature 92 112 IPR002067 GO:0055085
Pumo6g00059 331 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Pumo6g00059 331 PRINTS Mitochondrial carrier protein signature 42 56 IPR002067 GO:0055085
Pumo6g00059 331 PRINTS Mitochondrial carrier protein signature 238 260 IPR002067 GO:0055085
Pumo6g00059 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 229 315 IPR018108 -
Pumo6g00059 331 FunFam ADP,ATP carrier protein ER-ANT1 27 321 - -
Pumo6g00059 331 Pfam Mitochondrial carrier protein 230 315 IPR018108 -
Pumo6g00059 331 Pfam Mitochondrial carrier protein 26 119 IPR018108 -
Pumo6g00059 331 Pfam Mitochondrial carrier protein 130 221 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00059 Pumo-Chr6 671069 674622 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00059 24 319 Antiporters AT5G17400 77.703 2.25e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00059 K05863 - gmx:100798418 598.971