Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00051 ATGTGTTCTCTCTTAGATGAGTGCTTGTTGGAGGTGGATGCCGATGGAAACGTCAAACCGAAAATCCAGATAAGGAATCTGATCAGAGTTTCGGATGATGGGGTTCCGATCCTCAAAGGCATCAACCTTGACATCCCAGAGGGTGTCATCCTGGGAGTCATAGGCCCCAGCGGCAGTGGCAAGTCAACGCTCTTGAGGGCCCTTAACCGCCTCTGGGAGCCACCCTCCGCCTCCGTCTTCCTCGACGGCAAAGACATCTCCCATCTCGACGTTCTCTCTCTCCGCCGTAACGTTGGCATGCTCTTTCAGCTCCCTGCTCTCTTTCAAGGCACTGTTGCAGACAATGTGAGGTATGGACCACAACTTAGAGGAAAAAACCTAAGCGATGATGAGGTCCGCAAGTTGCTCCTAATGGCCGACCTAGATGCTTCTTTCATGGATAAGCCCGGGGCTGAACTCTCTGTCGGTCAAGCTCAAAGAGTTGCACTTGCTAGGACTTTAGCTAATTCACCACAGGTTTTGTTGCTGGATGAGCCAACTAGTGCGTTAGATCCAATATCCACAGAAAACATAGAGGATGCTCTCATGAAGCTGAACAAGAATCGGGGCATCACAGTCATTATGGTCTCTCATAGCATCAAGCAAATCCAGAGGATCGCTGACATAGTCTGTCTGCTTGTTGACGGTGAAATTGTTGAAGTTCTCAACCCTCATCAACTCTCTGAGGCCAACCATCCCATGGCACAAAGGTTTCTTCAACTCAGTTCTTAA 771 0.4955 MCSLLDECLLEVDADGNVKPKIQIRNLIRVSDDGVPILKGINLDIPEGVILGVIGPSGSGKSTLLRALNRLWEPPSASVFLDGKDISHLDVLSLRRNVGMLFQLPALFQGTVADNVRYGPQLRGKNLSDDEVRKLLLMADLDASFMDKPGAELSVGQAQRVALARTLANSPQVLLLDEPTSALDPISTENIEDALMKLNKNRGITVIMVSHSIKQIQRIADIVCLLVDGEIVEVLNPHQLSEANHPMAQRFLQLSS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00051 256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 243 IPR027417 -
Pumo6g00051 256 CDD ABC_PstB_phosphate_transporter 22 240 IPR005670 GO:0005315|GO:0016020|GO:0035435
Pumo6g00051 256 FunFam ABC transporter, ATP-binding protein 19 251 - -
Pumo6g00051 256 ProSitePatterns ABC transporters family signature. 153 167 IPR017871 GO:0005524|GO:0016887
Pumo6g00051 256 Pfam ABC transporter 38 181 IPR003439 GO:0005524
Pumo6g00051 256 SMART AAA_5 47 230 IPR003593 GO:0016887
Pumo6g00051 256 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 15 255 IPR005670 GO:0005315|GO:0016020|GO:0035435
Pumo6g00051 256 Gene3D - 19 255 IPR027417 -
Pumo6g00051 256 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 22 253 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00051 Pumo-Chr6 567578 568586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00051 35 254 Calmodulin-binding Proteins AT2G36910 31.466 7.35e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00051 K02068 - gmx:100791365 439.884