Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00046 ATGGCGAGGCCTGAAAGGACAGGTAGAAATAGAAGCCTAGAGACTCTAATGGACTCAGACAAACCAGGAATCGGAAGAAATGTGAACCACTTGAGGCCCCAGAAGTCCATTCCTGGCTATGGCCTAGAATTCAGTAACCTCTCCTACAGTATCATAAAGAAGCAGAAAAAGGATGGAGTCTTGATCAACAGAGAAACATATCTTCTTCATGATATCTCTGGCCAGGCAATAAAAGGTGAAATTATGGCAATCATGGGGCCTAGTGGTGCTGGCAAATCCACTTTTCTTGATGCATTGGCTGGCCGAATTGCAAAAGGGAGTCTAGAAGGATCAGTTAGAATTGATGGAAAACCAGTTACTACAAGCTACATGAAAATGGTGTCATCCTATGTGATGCAAGATGACCAGCTCTTCCCTATGTTGACAGTTTTTGAAACATTTATGTTTGCAGCTGAAGTTAGGCTTCCTCCTTCCATTTCCAGGGGTGAAAAGAAGAAGAGGGTTTATGAGCTCCTTGACCAACTGGGCTTACAGAGTGCTACACATACCTATATTGGTGACGAAGGAAGGAGAGGAGTGTCAGGAGGGGAACGACGAAGGGTATCTATTGGCATAGACATCATCCATAAGCCATCACTTCTGTTTCTTGACGAACCTACCTCAGGCCTTGATTCTACAAGTGCTTACAGTGTTGTAGAAAAGGTTAAAGACATAGCTCGAGGAGGAAGCATTGTCCTTATGACCATACACCAGCCTTCATTTAGAATTCAAATGCTCCTGGACCAGATCACCGTCCTTGCAAGGGGAAGACTGATATACATGGGAAAGCCAGATGCAGTTCAGGCTCACATGTCGAGATTTGGAAGGCCTGTACCTGATGGAGAAAACTGTATTGAGTATCTCCTAGATGTTATAAGTGAATATGATCAAGCAACGGTTGGGCTTGAACCCCTTGTCCAATTCCAACGTGATGGCCTCAAACCTGACCCAGCAGCCATGACGCCTGTTCCAAGAACACCTTACAAAAGGAACACCCCTGCTGCTGCATCATCTAAACACCTGATTAGCCTACGCAGCCAAGGATTTACTGCTGGAACACAACAGCCCGATTCTGCACAGTTTAGTTATCATGGCGAGGAAGACGATGATGAGGATTTTGATAACTCCCTTGAAAGGAAAAGTGCTCCAACACCAAGGAATATGACTAGTGGTGTTCACCCACTTTTGGCTTCTCAGTTCTACAAAGATTTCTCAGCCAAAGATTTCTCTGTCTGGCTTTATCATGGTGTAGTAGGAACCCCGCGTCGCCAACCATCATGGACTCCAGCTAGAACTCCAGGATGGACACCTGGGAAAACACCAATGTCTGTAGTTTCCAACCAATATTCTGCAGCTTTTCAGGATCCTTATCGCCCCAAAACTAATGCAGTACTGGTTGGCCAGTCTGTGGACTACTCAGCAACTTCATATGAAGGATTTGAGATTGAGGAAGTGCTTGATGAGCCAAACTTTGGATCCAAGTATGCAAACCCATGGTTGCGTGAGGTTGCAGTGCTCTCATGGCGAACAGCACTCAACGTGATTCGCACCCCAGAACTCTTCCTCTCCCGTGAGATTGTGTTAACTGTTATGGCACTTATCCTGTCCAGCATTTTTCGAAAACTGAGTCATCCTTATTTCGAAGACATCAATAGGCTCCTCAATTTCTACATCTTTGCAGTGTGCCTTGTTTTCTTTTCTTCCAATGATGCAGTCCCGTCTTTTATCATGGAGAGGTTCATCTTCATCAGGGAGACTTCCCATAATGCTTACCGTGCTTCTTCATATGTCATTTCTTCCCTCATTGTTTACCTCCCATTTTTTGCTGTTCAAGGCTTCACATTTGCTGTCATAACCAAAGAGATGCTCCACTTGAGAAGCAGTCTCTTGTATTTCTGGCTAATACTTTATGCCTCGCTTATTACTACCAATGCATATGTGATGCTTGTTAGTGCACTTGTGCCTAGTTACATCACAGGGTATGCAGTAGTCATAGCCACAACAGCACTCTTCTTTTTGACCTGTGGTTTCTTCCTCAAGCGAACTCAGATACCCATTTACTGGAGGTGGCTCCACTATATTTCTGCAATCAAATATCCATTTGAGGCATTGCTCACAAATGAATTCAATAACCTCAACTGCTACACAGGAAACATGGAAGAATTATCCCCTGGACCATTAGGTAACCTGAAGCTCAGCAAACACCATAACTCCAGTCTGCCCGCTAACTGCTTATTAGGGAAAGATATCTTGTCCTCCATGGATATTACAATGGAAAACATATGGTATGACATCTTAATCCTGCTAGCTTGGGGTGTTCTTTACAGGTTCTTCTTCTATTTGGTTTTGAGATTTTACTCCAAGAATGAGAGAAAATGA 2418 0.4396 MARPERTGRNRSLETLMDSDKPGIGRNVNHLRPQKSIPGYGLEFSNLSYSIIKKQKKDGVLINRETYLLHDISGQAIKGEIMAIMGPSGAGKSTFLDALAGRIAKGSLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRGEKKKRVYELLDQLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARGGSIVLMTIHQPSFRIQMLLDQITVLARGRLIYMGKPDAVQAHMSRFGRPVPDGENCIEYLLDVISEYDQATVGLEPLVQFQRDGLKPDPAAMTPVPRTPYKRNTPAAASSKHLISLRSQGFTAGTQQPDSAQFSYHGEEDDDEDFDNSLERKSAPTPRNMTSGVHPLLASQFYKDFSAKDFSVWLYHGVVGTPRRQPSWTPARTPGWTPGKTPMSVVSNQYSAAFQDPYRPKTNAVLVGQSVDYSATSYEGFEIEEVLDEPNFGSKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLTVMALILSSIFRKLSHPYFEDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGFTFAVITKEMLHLRSSLLYFWLILYASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPIYWRWLHYISAIKYPFEALLTNEFNNLNCYTGNMEELSPGPLGNLKLSKHHNSSLPANCLLGKDILSSMDITMENIWYDILILLAWGVLYRFFFYLVLRFYSKNERK 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00046 805 MobiDBLite consensus disorder prediction 363 404 - -
Pumo6g00046 805 FunFam ABC transporter G family member 6 57 284 - -
Pumo6g00046 805 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524|GO:0016887
Pumo6g00046 805 MobiDBLite consensus disorder prediction 1 32 - -
Pumo6g00046 805 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 293 IPR003439 GO:0005524
Pumo6g00046 805 CDD ABCG_EPDR 42 275 - -
Pumo6g00046 805 Gene3D - 42 288 IPR027417 -
Pumo6g00046 805 Pfam ABC-2 type transporter 516 722 IPR013525 GO:0016020|GO:0140359
Pumo6g00046 805 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 34 792 - -
Pumo6g00046 805 MobiDBLite consensus disorder prediction 326 350 - -
Pumo6g00046 805 MobiDBLite consensus disorder prediction 1 16 - -
Pumo6g00046 805 SMART AAA_5 78 278 IPR003593 GO:0016887
Pumo6g00046 805 Pfam ABC transporter 69 221 IPR003439 GO:0005524
Pumo6g00046 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 287 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00046 Pumo-Chr6 510076 512865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00046 68 289 Calmodulin-binding Proteins AT2G36910 26.957 7.49e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00046 K05681 - gmx:100819497 1464.51