Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00036 ATGGCAGTTGCTCGCGAGCGCCGCCAAATCAACCTCCGCCTCCCCCTCCCGGAGCCCTCCGAGCGCCGCCCCCGTTTCCCTCTTCCACTGCCCCCATCCTCCTCCGCCGCCAAGCCCGATGCCATTGCCCCCGCCGACATCGAAAAGCTCCACGTCCTCGGCCACGGCAACGGCGGCACCGTCTACAAAGTCCGGCACAAGCGCACCGCCGCCGTCTACGCCCTGAAGGTGGTCCACGCTGACTCGGACGCGGCCACCCGACGGCAGGTGCGGCGAGAGATGGACATCCTCCGGCGAACGGACTCCCCCCACGTGGTCCAGTACCACGGGTTCTTCGAAAAACCGTCGGGCGACGTGGCTATCCTGATGGAGTACATGGAAGTTGGGACGCTGGAGACGGTCCTCAAGAAAAACGGCACGTTCTCTGAGCCCGAACTGGCGAAGGTGGCGCGTGAGGTTCTTAACGGGCTCAGCTACCTCCACGCCCACAAGATCATACACCGCGACATCAAGCCCTCCAACCTTCTCGTCAACAACAACATGGACGTTAAGATAGGGGATTTCGGTGTCAGCAAGGTTATGTGTCGCACTCTCGACGCCTGCAATTCCTACGTTGGAACCTGCGCCTACATGAGCCCCGAGCGCTTCGACCCCGATTCTTATGGCGGCAATTACAACGGTTATGCTGCTGACATTTGGAGCTTGGGCCTCACCCTCTTTGAGCTCTACGTCGGCCACTTCCCCTTCCTTCCCATGGGCCAGAGACCCGATTGGGCCACTCTTATGTGCGCCATTTGTTTCGGGGACCCACCCACCTTGCCCGAGGCTGCTTCCCAAGAGTTTAGGAGCTTCATAGGCTGTTGTTTGATTAAGGAGTCCACTGAGCGGTGGTCCGCTTCGCAGCTCTTAACACACCCCTTTCTGAGTGCTTACTCTTAG 939 0.6017 MAVARERRQINLRLPLPEPSERRPRFPLPLPPSSSAAKPDAIAPADIEKLHVLGHGNGGTVYKVRHKRTAAVYALKVVHADSDAATRRQVRREMDILRRTDSPHVVQYHGFFEKPSGDVAILMEYMEVGTLETVLKKNGTFSEPELAKVAREVLNGLSYLHAHKIIHRDIKPSNLLVNNNMDVKIGDFGVSKVMCRTLDACNSYVGTCAYMSPERFDPDSYGGNYNGYAADIWSLGLTLFELYVGHFPFLPMGQRPDWATLMCAICFGDPPTLPEAASQEFRSFIGCCLIKESTERWSASQLLTHPFLSAYS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00036 312 ProSitePatterns Protein kinases ATP-binding region signature. 53 76 IPR017441 GO:0005524
Pumo6g00036 312 Gene3D Transferase(Phosphotransferase) domain 1 129 312 - -
Pumo6g00036 312 SUPERFAMILY Protein kinase-like (PK-like) 46 309 IPR011009 -
Pumo6g00036 312 SMART serkin_6 47 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00036 312 CDD PKc_MAPKK_plant_like 45 312 - -
Pumo6g00036 312 FunFam Mitogen-activated protein kinase 2 128 312 - -
Pumo6g00036 312 MobiDBLite consensus disorder prediction 1 39 - -
Pumo6g00036 312 Pfam Protein kinase domain 48 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00036 312 ProSiteProfiles Protein kinase domain profile. 47 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00036 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Pumo6g00036 312 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 38 310 - -
Pumo6g00036 312 Gene3D Phosphorylase Kinase; domain 1 32 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00036 Pumo-Chr6 405428 406747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00036 1 308 MAP Kinase Kinase Gene Family AT1G73500 62.136 5.59e-137 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pumo6g00036 Pkinase 2.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00036 K20604 - qsu:112004321 466.848