Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00034 ATGCGCTGTATACAGGACAATGGAGCGCCACCTGCATTAGCCTCTGTCTTTCATGCATTTGCTAATAATAATGACTCCAATGGTCATTATGTGCCTCTGCTTCATCAGATTTTGTATTGTCTCAATCCCATGTTTCCACACCAATTGGAAGCCCGCCAACATTTGGCCTCTAAGCCTTCTTTACGTTGTATGGTTTCACTTTTGAGGCAACAAGATCTCTCCGGGAAAGAGACCTCTATTCTCGCCCTCAAACACCTTCTTTCTTTTGGTGACCACCAACACCTCCAGGCTCTTGCGGACATTCAAGGAATTAACCAACTATTGCTCCAATTTCTTAACCAAAGAATTTTCGGTCCAACTATTACCAAGGCTTCCTTGGCGCTAGTTTGGTATTTGGTTTCCTCTTCTTCTCCTTGCAGTGACAATATGAGATTCAACTTTATTCAATTGGGCATGGTCTCTTTAACGTTGGACATTCTCGTTGACTCCGGAAACAGCCTGTGTGAGAAGGCTCTCGCTGTTCTTGACTCCCTCTGCGGTTCTCAAGAAGGAAGAGAAAAGGCTTATAGTAATGCGTTAGCGATTCCTCTCTTGGTCAAGAAATTGTTGCGAGTTTCATCCTTGGGCTCGGATTACTCTGTTTCTGCCATTTGGAAGCTGTGCAAATTTGGAGAAGAAACCGTTCGGATTGAGGCCCTTCAAGTGGGTGCATTTCAGAAGCTGCTGCTAGTGTTGCAGGTTGGTTGTGGTGATCACACCAAGGAGAAAGCCACCCAACTTCTCAAATTGCTTAATCCTTACAGGGATGGCGTCGTCGAATGCATAGATTCAGATTTCAAGAACCTTAAAAGATCAATTTAA 861 0.4425 MRCIQDNGAPPALASVFHAFANNNDSNGHYVPLLHQILYCLNPMFPHQLEARQHLASKPSLRCMVSLLRQQDLSGKETSILALKHLLSFGDHQHLQALADIQGINQLLLQFLNQRIFGPTITKASLALVWYLVSSSSPCSDNMRFNFIQLGMVSLTLDILVDSGNSLCEKALAVLDSLCGSQEGREKAYSNALAIPLLVKKLLRVSSLGSDYSVSAIWKLCKFGEETVRIEALQVGAFQKLLLVLQVGCGDHTKEKATQLLKLLNPYRDGVVECIDSDFKNLKRSI 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00034 286 SUPERFAMILY ARM repeat 8 264 IPR016024 -
Pumo6g00034 286 Gene3D - 2 276 IPR011989 -
Pumo6g00034 286 PANTHER WDSAM1 PROTEIN 2 265 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00034 Pumo-Chr6 391836 392696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00034 2 284 U-box Gene Family AT5G37490 36.491 9.67e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00034 - - vun:114179193 414.075