Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00024 ATGGTACGGAATGATTCTTTCTCAGCCTCCTTTGATTTGTTTTGTAGGGTGGAGAGCTTTATTGAACACCAAGACGCGTGCAACGTGGGGAGGTTGGGGTCAGAAGCGCAGGCAGCTGCATGCTTGTCTCGAACTGCTTCAAGCCCATCAAGCGAAACAAATTTCAGCACAGCAGGCCCTTGGCAAAGTGGTGTAATAATTCCAAAGCCCACCGCCGTAACAGTAGAATTAACGAACCCTACCATTGTCACTGCCGATACCAACAACAAAGACCAACTCCACCCCAACCTGGATCTTCAGCTCTCTACAGCCACTCCTACACAGTTGCAGCAGCTATCCATAGGGAAGAAGGAAAGGCGGGTTCAAGAAGAGGCACGTGAGCAATTGAGGATAGCGATGGCGGAGAAAGCGTTCGCGGAAGAGGCAAGGAAGCAAGCCAAGAAGCAGATCGAACTCGCGGAACTTGAGTTCACTAACGCCAAGAGGATAAGACAACAAGCGCTTGCCGAACTCGACAAAGCCTATGCCTTGAAGGACCATGCAATCAAACAGATCAATTCAACCATGCTTCAAATCACTTGCCTCGCTTGCAAGCACCATTTTCAATCCTCTCCCCCGGCCTCCGACCAAAACTCTTTCGTCTTCAGCTACATAACAACACAAGCTCCCCAAGTAGAAAAACATCGTGTCAAAGCCATTATTAACTCTTAG 711 0.4895 MVRNDSFSASFDLFCRVESFIEHQDACNVGRLGSEAQAAACLSRTASSPSSETNFSTAGPWQSGVIIPKPTAVTVELTNPTIVTADTNNKDQLHPNLDLQLSTATPTQLQQLSIGKKERRVQEEAREQLRIAMAEKAFAEEARKQAKKQIELAELEFTNAKRIRQQALAELDKAYALKDHAIKQINSTMLQITCLACKHHFQSSPPASDQNSFVFSYITTQAPQVEKHRVKAIINS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00024 236 PANTHER OS03G0310200 PROTEIN 16 219 - -
Pumo6g00024 236 Coils Coil 122 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00024 Pumo-Chr6 314133 314843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00024 2 220 C2H2 Transcription Factor Family AT2G01940 35.849 6.00e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00024 K25871 - gmx:100798167 279.256