Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00021 ATGGCGGACCCAAACACAAGCTCAGTTGATGTGATTTTGGACTTTCTTAGGAGGAATCGATTCACCAGAGCTGAGGCAGCTTTGCTCAGTGAGATCAATAATCGTCCTGACTTGAATGGCTTCCTTCAGAAGCTTACCTTGGAAGAAAAGGCCTCACCTCAAGGGCTGGAATCTCATCGTGACACTCTTGAAGTTTCTAAAGAACTGATTGTCAAGGAAATAGAGTGTGGGAATTGCCCAAATGCCATGGTGGTTGGGACAAGTGACAACAACTTCATTTTCTCCAATAATGAGGAGGATGCTATGCTTGATTTATACTCCTGGAAGTTCAACCCCAGCAATGGTCCTGTGGAGCCTTACCAAAACGATGGTGGTAGTAGGGCTCATAATACTTTGAGTTTGAAGCCCACTGTATCACAGCAATCAAAAGTTGATGTAATTGCACCCAATACCAATTCAAAGTTTGGGGAGGAAAATGCTGTGCTTGCTGACAAAAAATTGTTGTGGCCTGGAAGTAGTAGTAAAGCCTCTATGGATCTTAAGTACGACCTTGTGCAAAGCAAGGAACCTATGGAAATTGATCGGCAACTTAAATTCAATAGTTCATCTCTTAAAGTGAACTTTACAGATAATCCCTGGTCAAGAACGGACGAGAATGTGAATTCGTCTTCAGACTCCGGCAAAGATTGTTCTGTCAAGACTGTCTTTCTGTTCTCAAAAGGGGACGTGTCTACAAGCTTTAATGGTGCCACTTATTCTGACAAAAAAGAGGAGAAAAAAAGGGTAGAAATTAGTGATACTAGGACATCTATAAAAGAGCAGGTGGATGAATTGGGGAGGGCTATTTACTTTGTCAAGACACCAGGCAGTTCTGAACAGAAGATGATTGACAACTTAAGTTTTCCTCTTCCCCCTGAAAATCGGAAGGAAGTGTTTCCTAGGCTTCCTCCGGTCAAACTCAAGTCAGATGATAAGCCCTTGGTTGTTAATTGGGAGGAGAAGTTTGAGCGAGATCGAGATGGACCAACTTCAAAACTCCCTGGTGCTGACAGCACTTTGCTTATTGGTTCATATCTGGATGTACCTATTGGACAAGAAATTAACGATTCAGGTATGAGGAGGGCTACAGGGGGCAGTTGGTTATCTGTAAGTCAAGGGATAGCGGAGGATACATCTGATCTTGTATCAGGATTTGCTACAATTGGTGATGGGTTGAGTGAATCCATTGACTATCCGAATGAATATTGGGACTCCGATGAATATGATGATGATGAGGATGTTGGGTACATGAGACAACCTATTGAGGATGAAGCCTGGTTTTTGGCACATGAAATTGATTACCCTAGTGACAATGAAAAGGGGACCGGGCATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGGGAGCGATATCTTCAGGCAAATAATGTTGAACCAGTCACAGCTACTGATGATCCTATTGGTCTAACAGTTACTGAGTATGGAAGGACTAATGATAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTGAACCTGATGTGTGCAGAACCAGTCTGGCGGGGCTTTGTCCCTCAGACAAATGAACTCATCATGCTAGGAGATGGGAGGGTTTTGAATGATAATGTAAGATCACGGCTAGAGGACATCAGTATGGATGATGATCAACATGGTTCAGTTAGGTCAATTGGGGTAGGGATCAACAGTGATGCTGCAGATATTGGTAGTGAAGTGCGTGACAGTTTGGTTGGTGGTAGTAGTGAAGGAGATTTAGAATATTTCCGTGATCGTGATGCTGGACTTGGAGGTTCCAGGCACTCTCATCATGATTTGGATAAGAAATCTACTAACAAATCAAGCAAAAATAAGAACAATGACAAGAGTGAGTCAAATAAATATGTCATAGGATGTGATAAATTGCAGATGAAAGCTCATGGCGATGGAAACTTCTCATTCCCCTTATCTTTGAAGGATGGTCAGATGATTCAGGCTTCCACCAATAAGTCCCTGTGGTCAAATAACGGCAACACAGATGAAACTGATGACTGTCTTAGTGCATTTGTGGGAACTGATGACATGCTTGCTTCGTGGAGGCGAAAAAGCAGTGATTCGTCACCTGTTAAAAGTTCTAGAGATGAGAATAATGCCAACATTGTAAGATCCACAAACTCTTCTCCGACAACAGTCTCAAATTATGGATATTCTGAAAGAGAGCATGTGAAGGTAGAAGAGGATGAAAAGACTGGAATTGCAAGGGAAGATGATCTAGGAGCATCGCTGGAGGATGAAGAGGTAGCTGCTGTGCAAGAGCAAGTAAGGCAGATAAAGGCACAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTACACAGGAAAAACAGGCATGTTTTTAATGTAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCCGTAATAGCCGGAAGGTATCATGTTACTGAGTATCTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTACATACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTTTTTGACCAAAGTCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGCAGACAAGTATCACATTCTTCGATTATATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCAAACTTGTATGAGTTTCATAAATTTAATCGAGAATCAGGTGGTGAAGTGTACTTTACAATGCCAAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCACTTCAGTTTTTGCATAGCCTTGGACTAATACACTGCGACTTGAAGCCAGAGAATATTTTGGTTAAAAGCTATAGTAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAAACAGATCACCTTTGTTCTTATGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGACTTCCATATGACAAGAAGATCGATATCTGGTCTCTTGGCTGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGGTCCAATTGATCAAAGTATGCTTGCAAAAGGACGGGACACATATAAGTACTTCACCAAAAATCACATGCTTTATGAAAGGAATCAGGAAACCAACCGGTTAGAATACTTGATTCCGAAAAAGACATCCTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTTGCTCACTTGCTTGAAGTCAACCCTAAGAAGCGGCCCTCTGCATCTGAGGCCCTGAAGCATCCATGGTTGTCATACCCATATGAACCCATATCATCTTGA 3471 0.4149 MADPNTSSVDVILDFLRRNRFTRAEAALLSEINNRPDLNGFLQKLTLEEKASPQGLESHRDTLEVSKELIVKEIECGNCPNAMVVGTSDNNFIFSNNEEDAMLDLYSWKFNPSNGPVEPYQNDGGSRAHNTLSLKPTVSQQSKVDVIAPNTNSKFGEENAVLADKKLLWPGSSSKASMDLKYDLVQSKEPMEIDRQLKFNSSSLKVNFTDNPWSRTDENVNSSSDSGKDCSVKTVFLFSKGDVSTSFNGATYSDKKEEKKRVEISDTRTSIKEQVDELGRAIYFVKTPGSSEQKMIDNLSFPLPPENRKEVFPRLPPVKLKSDDKPLVVNWEEKFERDRDGPTSKLPGADSTLLIGSYLDVPIGQEINDSGMRRATGGSWLSVSQGIAEDTSDLVSGFATIGDGLSESIDYPNEYWDSDEYDDDEDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEDDDQSFAEEDSYFSGERYLQANNVEPVTATDDPIGLTVTEYGRTNDNDLMAQYDGQLMDEEELNLMCAEPVWRGFVPQTNELIMLGDGRVLNDNVRSRLEDISMDDDQHGSVRSIGVGINSDAADIGSEVRDSLVGGSSEGDLEYFRDRDAGLGGSRHSHHDLDKKSTNKSSKNKNNDKSESNKYVIGCDKLQMKAHGDGNFSFPLSLKDGQMIQASTNKSLWSNNGNTDETDDCLSAFVGTDDMLASWRRKSSDSSPVKSSRDENNANIVRSTNSSPTTVSNYGYSEREHVKVEEDEKTGIAREDDLGASLEDEEVAAVQEQVRQIKAQEEEFETFNLKIVHRKNRHVFNVTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00021 1156 CDD PKc_DYRK_like 845 1147 - -
Pumo6g00021 1156 SMART serkin_6 845 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00021 1156 ProSiteProfiles Protein kinase domain profile. 845 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00021 1156 FunFam Putative serine/threonine-protein kinase dyrk2 839 926 - -
Pumo6g00021 1156 MobiDBLite consensus disorder prediction 723 758 - -
Pumo6g00021 1156 Gene3D Phosphorylase Kinase; domain 1 839 926 - -
Pumo6g00021 1156 Coils Coil 792 812 - -
Pumo6g00021 1156 MobiDBLite consensus disorder prediction 618 656 - -
Pumo6g00021 1156 PANTHER DUAL SPECIFICITY PROTEIN KINASE 381 1147 - -
Pumo6g00021 1156 Pfam Protein kinase domain 845 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00021 1156 ProSitePatterns Serine/Threonine protein kinases active-site signature. 971 983 IPR008271 GO:0004672|GO:0006468
Pumo6g00021 1156 Gene3D Transferase(Phosphotransferase) domain 1 899 1147 - -
Pumo6g00021 1156 MobiDBLite consensus disorder prediction 721 759 - -
Pumo6g00021 1156 MobiDBLite consensus disorder prediction 447 480 - -
Pumo6g00021 1156 SUPERFAMILY Protein kinase-like (PK-like) 834 1149 IPR011009 -
Pumo6g00021 1156 FunFam Serine/threonine-protein kinase ppk15 924 1148 - -
Pumo6g00021 1156 MobiDBLite consensus disorder prediction 618 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00021 Pumo-Chr6 253552 263281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00021 844 1142 MAP Kinase Gene Family AT5G19010 31.348 6.76e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pumo6g00021 Pkinase 1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00021 - - gmx:100797095 1914.04