Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00006 ATGTCAACCTTCATGGAACAACAATTTGTTCCTTTTTTCCCGTCCAGTAGAGAGAATGATTCAGTTGTTCCACATCTTGTGTGTCATGCTAAGAAGAAACTCATTTTTGTGGACCAAAATATTGATTACATTGAGGGTCCCAAATTAAGGAAGTGGTATGGCATACCTGATCTCCTTGAAAAAGATGGTACTGCTATAGAGAATGATAAGGATGATTATCTGGGAGCTAGTAATCAACGATATGCTTATATTGGTGACATTGTTGTTGCTGTAATCAAACAAGCAGTACCAAATACGAACTTAGAAAAATCAGAAGTGATCAGAGTTGTAATTGTACGTACTTGTAAAGAACTCAAATGTAGCAATGGTATAATAATTCAATATGATGACAATGCTGTAATTGTCATTGATCAAGAAGGAAATCCAAAAGGAACTCAAATCTTTTGTGCAACCGCCCGGGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATAA 498 0.3514 MSTFMEQQFVPFFPSSRENDSVVPHLVCHAKKKLIFVDQNIDYIEGPKLRKWYGIPDLLEKDGTAIENDKDDYLGASNQRYAYIGDIVVAVIKQAVPNTNLEKSEVIRVVIVRTCKELKCSNGIIIQYDDNAVIVIDQEGNPKGTQIFCATARELRQLNFTKIVS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00006 165 Gene3D Ribosomal protein L14 62 165 IPR036853 GO:0003735|GO:0005840|GO:0006412
Pumo6g00006 165 FunFam Ribosomal protein L14 101 165 - -
Pumo6g00006 165 SUPERFAMILY Ribosomal protein L14 75 165 IPR036853 GO:0003735|GO:0005840|GO:0006412
Pumo6g00006 165 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 74 165 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pumo6g00006 165 Pfam Ribosomal protein L14p/L23e 74 165 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pumo6g00006 165 SMART Ribosomal_L14_2 74 165 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00006 Pumo-Chr6 43254 44187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00006 82 165 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 29.762 4.51e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00006 K02874 - gmx:3989333 167.548