Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo68g00002 ATGGCTGAAGATGCCGCACTTGACTTGAAAAATCTTGTTAAGAAAGTTGATGTTGTTGCACCTCAAGATTCCAGCTTGGAACTTCTACATTTGCGTTCTGGTGATTCTGTTGTTGTTATTGGAGGTTCTTATGCTGTTGGTTGTCCATCAAAAGATGTTGATTCCAGAACCATTTTTGTTAGCAATGTTCATTTTGCTGCCACCAAAGATGGCCTGTCTCGGCATCTTAATAGATTTGGGGAAGTTTTAAAAGTGATTATAGTTACTGATGTAGCAACAGGGCAGCCAAAAGGGTTGTCACATGTGAAACAATTTTTGTTTTCTTTCTTTTTATATTCTTTTCAATTAAGCCATTTGGATTTTGATTTGTGCTTACTTAGCTACCTTGAAGCCAAAGAATCCATGGTATATAGCTACACAAAGAACTGCAATGCATTTGCTGCAAAATTGTCAAAGTATGAAGCTAAGAAGTTATCTGGGATCATTCCTGGGTCTAAAAGCTTCAAGGACGATGGATTTGGTCCTCCACCAGCAAGATGGAAAGGATCTTGTGGCCACTATTCTAATTTCTCAGGCTGCAATAAGTAA 588 0.3827 MAEDAALDLKNLVKKVDVVAPQDSSLELLHLRSGDSVVVIGGSYAVGCPSKDVDSRTIFVSNVHFAATKDGLSRHLNRFGEVLKVIIVTDVATGQPKGLSHVKQFLFSFFLYSFQLSHLDFDLCLLSYLEAKESMVYSYTKNCNAFAAKLSKYEAKKLSGIIPGSKSFKDDGFGPPPARWKGSCGHYSNFSGCNK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo68g00002 195 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 58 100 IPR000504 GO:0003723
Pumo68g00002 195 Gene3D Peptidase S8/S53 domain 159 195 IPR036852 GO:0004252|GO:0006508
Pumo68g00002 195 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 56 103 IPR000504 GO:0003723
Pumo68g00002 195 SUPERFAMILY RNA-binding domain, RBD 48 101 IPR035979 GO:0003676
Pumo68g00002 195 Gene3D - 42 105 IPR012677 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo68g00002 126 194 Subtilisin-like Serine Gene Family AT4G00230 41.026 3.26e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo68g00002 - - gmx:100795950 107.071