Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo67g00037 ATGCCTAATATTTACAACGCTCTGGTAGTTAAGGGTCGAGATACTGTTGGTCAACAAATTAACGTGACTTGTGAAGTACATCAATTATTAGGAAATAATCGAGTTAGAGCTGTAGCTATGAGTGCTACAGATGGTCTAACGAGAGGAATGGAAGTGAGTGACACAGGAGCTCCCCTAAGTGTTCCAGTAGGTGGAGCAACTCTTGGACGAATTTTCAACGTGCTTGGAGAGCCCATTGATAATTTAGGAATAAAAGTAGTAGATCTTTTAGCTCCTTATCGTCGTGGAGGAAAAATAGGACTTTTCGGTGGAGCTGGAGTGGGTAAAACAGTATTGATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGAGGTGTATCTGTATTTGGCGGAGTAAGTGAACGTTCTCATGAGGGAAATGATCTTTATATGGAAATGAAAGAATTTGGAGATCTGAATGTATCTGCCTTATTGGGTCGAATGCCCTCTGCTGTGGGTTATCAACCCACTCTTAGTACTGAAATGGGTTCTTTACAAGAAAGAATCACTTCTACCAAAGAGGGGTCCATAACTTCTATTCAAGCAGTTTATGTACCCGCAGACGATTTAACCGATCCCGCCCCTGCTACGACATTTGCACATTTAGATGCTACTACTGTACTATCAAGAGGATTAGCGGCCAAAGGTATCTATCCAGCAGTAGATCCTTTAGATTCAACCTCAACTATGCTCCAACCTCGGATCGTTGGTGAAGAACATTATGAGACTGCGCAAAGAGTTAAACAAACTTTACAACGTTACAAAGAACTTCCAGACATTATAGCTATCCTTGGCTTGGAAGAATTATCCGAAGAAGATCGCTTAACCGTAGCAAGAGCACGAAAAATTGAGCGTTTCTTATCACAACCCTTTTTCATAGCAGAAGTTTTTACCAGTTCGCCGGGGAAATATGTTGGTCTAGCATAA 969 0.4118 MPNIYNALVVKGRDTVGQQINVTCEVHQLLGNNRVRAVAMSATDGLTRGMEVSDTGAPLSVPVGGATLGRIFNVLGEPIDNLGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVSERSHEGNDLYMEMKEFGDLNVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELPDIIAILGLEELSEEDRLTVARARKIERFLSQPFFIAEVFTSSPGKYVGLA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo67g00037 322 Gene3D - 83 153 IPR027417 -
Pumo67g00037 322 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 245 321 - -
Pumo67g00037 322 Gene3D - 53 82 IPR027417 -
Pumo67g00037 322 Gene3D - 154 242 IPR027417 -
Pumo67g00037 322 Gene3D - 1 52 - -
Pumo67g00037 322 PANTHER ATP SYNTHASE 1 83 - -
Pumo67g00037 322 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 154 242 IPR000194 GO:0005524
Pumo67g00037 322 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 1 58 IPR036121 GO:0046034|GO:1902600
Pumo67g00037 322 Gene3D - 245 322 IPR024034 -
Pumo67g00037 322 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 83 149 IPR000194 GO:0005524
Pumo67g00037 322 CDD ATP-synt_F1_beta_C 249 322 - -
Pumo67g00037 322 Pfam ATP synthase alpha/beta family, beta-barrel domain 1 56 IPR004100 GO:0046034|GO:1902600
Pumo67g00037 322 ProSitePatterns ATP synthase alpha and beta subunits signature. 233 242 IPR020003 GO:0005524
Pumo67g00037 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 246 IPR027417 -
Pumo67g00037 322 CDD ATP-synt_F1_beta_N 1 59 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo67g00037 155 306 Primary Pumps ATPases(2) AT1G78900 27.976 3.38e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo67g00037 K02112 - cpap:5878376 548.51