Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo67g00030 ATGCCTTATTATGGTCTTGCCTTTGTCAAGTGCGTGCTACACTTCTACTTGTCCATTTCCTTAGCTCATTTCCAGAGGAACGAGTGCAGGTCAAAGAAACATTCAGCTGTGTGGAGGATGCTGCTACCTAGGACCTTCTTTGCTTTCTTACTCTTTGCACTGAGTTGTTTCAGATGGCTGGAATATGCAGAATCCAAACTACCCCAAGAGGAGGTTGATGCTCTTAAAGAAATCACTAGCACGATGGGTGCCACCTATTGGGAGTTTGATGGTGATTCTTGTCATATTAAAATGCCGGGGTTAACACCAGAGCCACCTAAAGGATCTGAAAGCAGCATTGATTGTGATTGCACTTTTGTAAATAACACCTGTCATGTAGTAAGGCTTATCTTCAAGCGGCTCAACCTTCCTGGCATGCTTCCACCTTATTTGGTTAAGCTTCCTTACCTCAGAGAAGTTGATTTTGCTTTAAACTACCTAAGTGGTACGATCCCAAAGGAATGGGGCTCAACAAAGCTAACTAATATCTCTCTATTTGTGAATCGTATATCAGGGGAAATTCCTAAGGAGTTGGGAAGTATTACCACTCTAACATATCTGAACCTTGAAGCAAACCAATTTTCTGGTGTTGTTCCCCATGAACTTGGAAGTCTATCTAACCTGAAGATTTTGGTTTTATCATCCAATAAATTGTCTGGGAAGTTACCGGTGACACTTGCTAAGTTGCAGAATTTGACAGATTTCAGGATAAGTGATAACAGTTTCAGCGGAGAAATACCAAGCTTCATACAGAATTGGAAATTACTTCAAAGATTAGAAATGCATGCAAGTGGACTGGAGGGACCTATCCCATCAAATATATCTCTTTTGAGTAATTTAAATCTGTTGAGGATTAGTGACATAAATGGTCCAAGTCAGGATTTTCCCATTTTAAGAAACATGACAGGAATGACGATATTGGTTTTGAGAAATTGTCATATTACAGGAGAGCTTCCTAGTTACTTCTGGAGTATGAAGAATTTGAAAATGTTGGACGTCAGTTTCAATAAGTTGGTTGGGGAAATACCAGTCGCTGCACATGTGGGGCATCTGGGATTTCTCTTCCTAACTCACAACATGATAAGTGGTACTGTACCTGAGTCAGTCTTGATGGATGGAAGCAGTGTTGACCTTTCTTACAACAATTTTACGTGGCAAGGACCATATCAACCTGCTTGTAGAGATTACCTAAATTTAAACTTAAACTTGTTCAGGAGCTTCTTAGGGACCAAATTACGGGGGATTCTTCCATGTTCAAAGATCTCCAATTGTCCTGCATATTCTCGTTGTTTTCATGTTAATTGTGGTGGAAAGAATGTAAAAGTGATGGAAAATGATGAAAATATTCACTATGTAGGAGATGGACATGTGTTAGGTAGTGGTGCTGCTAAATATTTCATTGATTATGAAAATCACTGGGGATTTAGCAACACTGGGGATTTCATGGATGACGGTGATCAACTAAATTCACTTTACATTAGGTCTTCGCCATCTTCAAATTTGCCCGAATTATATAAAACGGCTCGTGTTACTCCAATTTCGCTTACTTATTTTTGCTACTGCTTGGAAAATGGGAAATATACTGTAAAACTCCACTTTGCAGAAATACAATTTTCAAACGATAACACATATGGAAGTCTTGGGAAGCGCTTATTTGATATTTATGTTCAGGAAAGATTATATAGGAAGGATTTTAATATTGAAGGTGAAACGCATGTTGCTCAAAAACCATATATACTGTCCTTATATAATGTCACTGTAACAGACAATATTCTGGAGATTCGATTCTACTGGGCTGGCAAGGGGACTACAAGGATTCCTGTTAGTGGAGTTTACGGTCCCCTCATATCAGCTTTCTCTATTGTTTCTGATTCTAAACCTTGTTCAGACCAAAATAATGCAAGGCATAAAATAATCGTTGGTGTTGGATTTGGAGTTACAGCTCTATGCCTTGTCATTATCATAGTTGGAATCTTTTGGTGGAAGGGCTACTTCAAAGGAATAATTAGGAGAATAAAAGGTACTGAAAGAGAAGACTGTTTAATGGGGACATTTACGTTAAAACAAATTAGAGATGCCACAGAGGATTTCAGTCCTGATAACAAGATTGGAGAAGGTGGTTTTGGTCCTGTCTACAAGGGTCAATTATCTGATGGTACATTGGTAGCAGTCAAACAACTTTCATCAAAGTCGAGGCAGGGAAACCGTGAATTTTTGAATGAGATAGGCATGATATCTTGTTTGCAACACCCTAATCTTGTGAAACTTCATGGATTTTGCATTGAAGGGGATCAATTGATATTGGTGTATGAGTACATGGAAAATAATAGCCTGGCTCGTGCTTTATTCAGCTCAAAAGATCAACTTAAACTTGATTGGCCAACAAGGCTTAGGGTCTGTATTGGCATAGCAAAAGGTCTTGCATTTCTACACGAAGAATCAAGACTCAAGATTGTTCATCGAGACATCAAAGCTACTAATGTGTTACTGGATGGGAATTTAAACCCTAAAATATCTGACTTTGGGTTGGCTAGGCTTGATGAAGAGGAGAACACCCATATCACCACCCGAGTAGCTGGGACAATGTCAATTATCTCTCCCTTGATAATACATCTCAATAAAAGTTTTCTTGATAATGAATTGTAA 2685 0.3873 MPYYGLAFVKCVLHFYLSISLAHFQRNECRSKKHSAVWRMLLPRTFFAFLLFALSCFRWLEYAESKLPQEEVDALKEITSTMGATYWEFDGDSCHIKMPGLTPEPPKGSESSIDCDCTFVNNTCHVVRLIFKRLNLPGMLPPYLVKLPYLREVDFALNYLSGTIPKEWGSTKLTNISLFVNRISGEIPKELGSITTLTYLNLEANQFSGVVPHELGSLSNLKILVLSSNKLSGKLPVTLAKLQNLTDFRISDNSFSGEIPSFIQNWKLLQRLEMHASGLEGPIPSNISLLSNLNLLRISDINGPSQDFPILRNMTGMTILVLRNCHITGELPSYFWSMKNLKMLDVSFNKLVGEIPVAAHVGHLGFLFLTHNMISGTVPESVLMDGSSVDLSYNNFTWQGPYQPACRDYLNLNLNLFRSFLGTKLRGILPCSKISNCPAYSRCFHVNCGGKNVKVMENDENIHYVGDGHVLGSGAAKYFIDYENHWGFSNTGDFMDDGDQLNSLYIRSSPSSNLPELYKTARVTPISLTYFCYCLENGKYTVKLHFAEIQFSNDNTYGSLGKRLFDIYVQERLYRKDFNIEGETHVAQKPYILSLYNVTVTDNILEIRFYWAGKGTTRIPVSGVYGPLISAFSIVSDSKPCSDQNNARHKIIVGVGFGVTALCLVIIIVGIFWWKGYFKGIIRRIKGTEREDCLMGTFTLKQIRDATEDFSPDNKIGEGGFGPVYKGQLSDGTLVAVKQLSSKSRQGNREFLNEIGMISCLQHPNLVKLHGFCIEGDQLILVYEYMENNSLARALFSSKDQLKLDWPTRLRVCIGIAKGLAFLHEESRLKIVHRDIKATNVLLDGNLNPKISDFGLARLDEEENTHITTRVAGTMSIISPLIIHLNKSFLDNEL 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo67g00030 894 Gene3D Transferase(Phosphotransferase) domain 1 786 889 - -
Pumo67g00030 894 Gene3D Ribonuclease Inhibitor 306 406 IPR032675 -
Pumo67g00030 894 Pfam Malectin domain 443 632 IPR021720 -
Pumo67g00030 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 831 843 IPR008271 GO:0004672|GO:0006468
Pumo67g00030 894 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 304 424 - -
Pumo67g00030 894 SUPERFAMILY L domain-like 116 379 - -
Pumo67g00030 894 Gene3D Ribonuclease Inhibitor 235 305 IPR032675 -
Pumo67g00030 894 Gene3D Ribonuclease Inhibitor 101 234 IPR032675 -
Pumo67g00030 894 Gene3D - 441 639 - -
Pumo67g00030 894 Gene3D Phosphorylase Kinase; domain 1 683 785 - -
Pumo67g00030 894 Pfam Leucine rich repeat 196 254 IPR001611 GO:0005515
Pumo67g00030 894 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 73 235 - -
Pumo67g00030 894 SUPERFAMILY Protein kinase-like (PK-like) 696 883 IPR011009 -
Pumo67g00030 894 Pfam Protein tyrosine and serine/threonine kinase 713 866 IPR001245 GO:0004672|GO:0006468
Pumo67g00030 894 FunFam Os07g0541700 protein 786 874 - -
Pumo67g00030 894 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 441 637 - -
Pumo67g00030 894 ProSiteProfiles Protein kinase domain profile. 710 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo67g00030 894 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 681 785 - -
Pumo67g00030 894 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 236 302 - -
Pumo67g00030 894 SMART serkin_6 710 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo67g00030 894 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 50 881 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo67g00030 47 877 Receptor kinase-like Gene Family AT1G29750 59.664 0.0 998
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo67g00030 Malectin 1.2e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo67g00030 - - mtr:11406167 1264.98