Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo67g00027 ATGGCTGATTATTCAGCAGGAACTGAATCCCATGAGGTAGTTGTAAATGTAACCAAGGACCCCTCCAAAACAATGGAACACTCAGATTCCTTTGTCTCTGTTCCTTTCTTGCAGAAGTTGGTAGCTGAGGTGGTGGGAACATATTTCTTGATATTTGCAGGGTGTGCTTCAGTGGTGGTGAACAAGAACAACAACAACGTGGTAACACTTCCTGGGATAGCAATTGTTTGGGGGCTGGTTGTGACAGTGTTGGTTTACACTGTTGGTCACATTTCTGGTGCCCATTTCAATCCTGCTGTCACCATTGCTTTTGCCTCCACCAGAAGGTTTCCCTTGATGCAGGTACCAGCTTATGTAGCAGCTCAACTCCTAGGAAGCACACTTGCAAGTGGAACTCTGAAACTATTATTTATGGGGAAGCATGACCAGTTTTCAGGAACATTCCCAGCTGGGACTAACCTGCAGGCTTTTGTGTTTGAATTCATAATCACCTTTCTCCTCATGTTTGTCATATCCGGGGTTGCCACCGATAACAGAGCGATCGGTGAGTTGGCCGGGATTGCCGTTGGGTCCACTGTGTTGCTGAATGTGATGTTTGCAGGGCCAATCACAGGAGCATCAATGAACCCAGCAAGAAGCATAGGGCCTGCATTTGTACACAATGAATACCGAGGAATATGGATATATTTAGTGTCTCCAACTCTTGGGGCTGTGGCTGGCGCATGGGTCTACAACAGTATTCGTTACACGGACAAGCCACTGCGTGAGATCACCAAGAGTGCCTCTTTCCTTAAAGCAGCAGGGCGTAGTGGTAGCTCTAGGTGA 825 0.4727 MADYSAGTESHEVVVNVTKDPSKTMEHSDSFVSVPFLQKLVAEVVGTYFLIFAGCASVVVNKNNNNVVTLPGIAIVWGLVVTVLVYTVGHISGAHFNPAVTIAFASTRRFPLMQVPAYVAAQLLGSTLASGTLKLLFMGKHDQFSGTFPAGTNLQAFVFEFIITFLLMFVISGVATDNRAIGELAGIAVGSTVLLNVMFAGPITGASMNPARSIGPAFVHNEYRGIWIYLVSPTLGAVAGAWVYNSIRYTDKPLREITKSASFLKAAGRSGSSR 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo67g00027 274 Pfam Major intrinsic protein 32 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo67g00027 274 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Pumo67g00027 274 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo67g00027 274 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo67g00027 274 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo67g00027 274 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo67g00027 274 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo67g00027 274 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo67g00027 274 PANTHER AQUAPORIN NIP2-1 23 264 IPR034294 -
Pumo67g00027 274 Gene3D Glycerol uptake facilitator protein. 3 258 IPR023271 -
Pumo67g00027 274 NCBIfam MIP family channel protein 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo67g00027 274 CDD MIP 38 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo67g00027 274 SUPERFAMILY Aquaporin-like 32 258 IPR023271 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo67g00027 34 273 Major Intrinsic Protein MIP AT5G37810 61.570 4.14e-104 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo67g00027 K09874 - gmx:100813448 460.299