Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo67g00024 ATGGAAACAGAGTTACAAGCTTTAGAGGATATAGGTTTGGATGTGGACAATGAAGTTGCTGGCAGTGGTTATGATGGAAGCACTGTTGCAGTTGGATATGCAAGCCATGAAGGCTTTGGAATTCAGGATGATGGTTGTGTTAATGATTTGGAAGGTGTTGAAACTGATGATGAACACGATGACGAGGAGGATGACGATGATGATGTGCATGTTGAAGAAGATGTTGAGAATGAGGATGTTGTTGGGTATGTAGGATATGATAATGAAGGGTGTTATGGTGAAGATCCTATAATTATTAATGGGCTTGATGACATATACTCATTTGATTTTGAAAGTCTTACATTTGCTATTTTGGAGCGGTTAGAATTTGTTGATCTTGAAGTTGCATACGAATTTTATAGTTGGTATGCAAGATTGTCTGGATTTTCTGTACGCAAGAGTAATGTGGTGAGAGATAAAAAAGGTGAGACATTGCAGCAGACATTTGTTTGCTCTCGAGAGGGTTTTCGAAAAAATGGTGGATTGAGTTTGCAACTGAGGAAGCGAAAGGCTAAAAATTTAACAAGGTGCGGCTGTGAGGCTTTGTTTCGTGTCCATGTTCACGTTGGAACTGGTCGGTGGTATGTTACAGTATTTCATTTTGATCATAAGCATGAGATGCTGGAGGGAAAGTTATGTGCATTACTACCCGCACATAGGAAAATGTCAGCAATTGATATAATTGAAATTGAGAATTATAGGAAAGTTGGCATTAGACCTCCGCATATGTATGCTGCCTTTGCAAACAGTAGCGGTGGTTATGAAAATGTACGATTTGTGAGAAAGGACATTTATAATCAAGTGGAGAGACAGCGACGCCAACACAAGTCAGATGTGCAGGGTGCATTGATGTACTTAAGGGAGTTGGGTTCAAAGGATCCAATGATGTATGTTTCATACACAGTTGATGCTGATAACAGACTCCAACATCTTTTTTGGTGCGATGGTGAAAGCCAAATGAATTATGTGGTATTTGGTGATGTGCTAGCATTTGATGCTACATATAAGAAGAATAAATACCTTTGTCCTTTTGTGGTTCTATCTGGTGTTAATCATCATAATCAGACCATAGTTTTTGCCACTGCTCTTGTAACGAATGAGACTGAAGAGACATATGTATGGTTGTTGGAACAATTTTTGGAGGCAATGAAGGGAAAAGCGCCATGTTCAGTTATCACGGATGGTGATGTTGCAATGAAGAACGCAATAAGACGTGTGTTTCCTAATACGCATCACCGCTTATGTGCATGGCACTTGTTGCGAAATGCAACAAGCAATTTGAAGAACCCTGCAATTATGCCTTTTTTGAAAAAATTAATGCTAGGTGACATTGATGTTGGTGAATTTGAAGAAAAATGGAATGAAATGTTGTCAACATTTGGCTTGGAGGATAACACTTGGGTTGTTGAATTGTATGAGAAAAAGAGGATGTGGTCTCCAGCACATATCCGTGGAAATTTTTTTGCAGGTATTAGGACCACTTCACGTTGTGAAGCCTTGCATGCCCACATTGGAAAATACGTGGACTCAAGAACTAATTTGACAGATTTTGTGCAGCAATTTCATAGGTGTTTAACCTATTTTCGGTACAGAGAGGTTGAAGCTGACTATCATTCTAATTATGGGGATGTTTATCTAGAAACAAATTTCCATGCTATTGAGAGGTTTGCTGGTAGACGATTAACTAAGGAAATGTTTTTGTCTTTTCAATCGTCTCTAAAGAAAACTGGAATGTTTAGGGTGGTTGAATGTCAGGAAATGACAATGTACTGTGTGTATACAATCCTAAAGTACCGAACAGGAGCTGTGTGGCATGTATCATATTGTCCTTCAAAATGTGAAATGAGATGTTCATGTTTACGGATGGAATCAATTGGTTTACCATGCATCCACATCCTAACCGTAATGGTGAATTTAGATTTCAATTACATACCTGAGTGCCTGATTCTTGACAGATGGACAAAGCTGGCTAAGGAGGGAATTCGTGGTACGTATCTTGATGGATCTATCTACTGGGACTCGCACTTGATTGCTAGATATGCAAGACTAGTTCATTTATCCAGACAAGTTTTTCAATACGCACACCGTGAGGATGAGGAATATGATCATTGGGTGCAATTGCTAACTGGTGAACTGACTCGGTTAAAGTTGAAGAATACAAATGATGATGCAGTTGAAGTGGCTAATACTGAAACAGAACAAATGACTGACACTGTATTGGATCCTCCTCGTGTGCGTCACAAAGGATGTGGTGCAGCTGAAAGTAGCCAGACAGGGGGTCGTAGAAGGCAACAAGCATGCGGAAATTGTGGTCAAATGGGACACAACAGACGTTCATGTACTGAACCCTCTCAAACCCAAGTAATTGGATCTAGCAATGTTCCGGCTGTTGAGTAG 2436 0.3978 METELQALEDIGLDVDNEVAGSGYDGSTVAVGYASHEGFGIQDDGCVNDLEGVETDDEHDDEEDDDDDVHVEEDVENEDVVGYVGYDNEGCYGEDPIIINGLDDIYSFDFESLTFAILERLEFVDLEVAYEFYSWYARLSGFSVRKSNVVRDKKGETLQQTFVCSREGFRKNGGLSLQLRKRKAKNLTRCGCEALFRVHVHVGTGRWYVTVFHFDHKHEMLEGKLCALLPAHRKMSAIDIIEIENYRKVGIRPPHMYAAFANSSGGYENVRFVRKDIYNQVERQRRQHKSDVQGALMYLRELGSKDPMMYVSYTVDADNRLQHLFWCDGESQMNYVVFGDVLAFDATYKKNKYLCPFVVLSGVNHHNQTIVFATALVTNETEETYVWLLEQFLEAMKGKAPCSVITDGDVAMKNAIRRVFPNTHHRLCAWHLLRNATSNLKNPAIMPFLKKLMLGDIDVGEFEEKWNEMLSTFGLEDNTWVVELYEKKRMWSPAHIRGNFFAGIRTTSRCEALHAHIGKYVDSRTNLTDFVQQFHRCLTYFRYREVEADYHSNYGDVYLETNFHAIERFAGRRLTKEMFLSFQSSLKKTGMFRVVECQEMTMYCVYTILKYRTGAVWHVSYCPSKCEMRCSCLRMESIGLPCIHILTVMVNLDFNYIPECLILDRWTKLAKEGIRGTYLDGSIYWDSHLIARYARLVHLSRQVFQYAHREDEEYDHWVQLLTGELTRLKLKNTNDDAVEVANTETEQMTDTVLDPPRVRHKGCGAAESSQTGGRRRQQACGNCGQMGHNRRSCTEPSQTQVIGSSNVPAVE 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo67g00024 811 MobiDBLite consensus disorder prediction 43 69 - -
Pumo67g00024 811 ProSiteProfiles Zinc finger SWIM-type profile. 617 653 IPR007527 GO:0008270
Pumo67g00024 811 MobiDBLite consensus disorder prediction 784 811 - -
Pumo67g00024 811 Pfam SWIM zinc finger 629 649 IPR007527 GO:0008270
Pumo67g00024 811 MobiDBLite consensus disorder prediction 49 69 - -
Pumo67g00024 811 SMART 26again6 628 655 IPR006564 GO:0008270
Pumo67g00024 811 SUPERFAMILY Retrovirus zinc finger-like domains 770 798 IPR036875 GO:0003676|GO:0008270
Pumo67g00024 811 ProSiteProfiles Zinc finger CCHC-type profile. 780 795 IPR001878 GO:0003676|GO:0008270
Pumo67g00024 811 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 121 704 IPR031052 GO:0006355
Pumo67g00024 811 Pfam MULE transposase domain 341 435 IPR018289 -
Pumo67g00024 811 Pfam FAR1 DNA-binding domain 131 221 IPR004330 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pumo67g00024 MULE 2.5e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo67g00024 - - tpra:123884554 824.313