Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo67g00023 ATGGATGATGCACAGGGTAGTTCAAGTTCCCTGCCCCCTTTCCTGGCAAAGACTTATGAGATGGTGGATGATCCTTCCACGGATTTGGTTGTTTCATGGAGTGTCACTAGCAAGAGTTTCATTGTATGGAATCCCCCAGAATTTGCAAGGGATTTACTGCCTAGATTCTTTAAGCACAACAACTTCTCAAGTTTCATCAGGCAGCTGAACACATATGGATTTAGAAAAATTGACCCAGAACAATGGGAATTTGCCAATGATGAATTTGTAAGAGGGCAACCTCATCTTATGAAGAACATCCATAGACGGAAGCCGGTTCATAGCCATTCTTTGCAGAATCTCCAAGCACAGGGCACACTAGGGGAGTCAGAAAGGCAGAGTTTTACTGATGAAATAGAGAAGCTTAAACACGATAAAGAGCAACTTCTTGTGGAATTACAGAAATATCAGCATGAGTGGCAGACATATGAGATACAAATACATTGCTCAAAAGATCGGTTGGAAAAATTGGAACAGAATCAACAAAGGATGGTTTCTTCTGTTTCTCACGTATTGCAGAAACCTGTGATTTCTGTAAATATCTTGCCTCTGACAGAAACCATGGATAGAAAACGAAGGTTACCGAGAAGTGGTCTCTTCTATGATGAAGCTAGCATTGAAGATGCTATTGAAACTTCCCAAATGTTACCAAGAGAAAATGCAGAGAATACCACTGTCTTGGCATTAAACGTGGAGCGACTGGATCAGCTTGAATCATCCATGGCGTTTTGGGAGGCTATTGTACATGATATTGGTGACACCTTCGTTCAAATTCAATCAAACACGGATTTTGATGAATCTACAATTTGTGCTGATAGTCCATCTATATCTTGTGCGCAATTAGATGTTGAAGTTCGGCCTAAGTCATCTGGAATTGACATGAACTCTGAGCCAACTACAGCTGCTGTTCCCGAGCCTGTTGCATCAAAAGAACAACCTGCGGGAACCACTGTTGCAGCAACTGGTGTTAATGATGTATTCTGGGAACAGTTCTTGACAGAGGATCCCGGTGCATCAGAAACACAGGAAGTGCAGTCAGAAAGAAAGGATTATGATGGCAGAAAGAATGAAGGAAAACCTAGCGACCTTAACAAATTTTGGTGGAACAAACGGAATGCAAATAATCTTCCAGAACAGATGGGGCATGTTAGTCAAGCAGAGAAAACTTAG 1209 0.4169 MDDAQGSSSSLPPFLAKTYEMVDDPSTDLVVSWSVTSKSFIVWNPPEFARDLLPRFFKHNNFSSFIRQLNTYGFRKIDPEQWEFANDEFVRGQPHLMKNIHRRKPVHSHSLQNLQAQGTLGESERQSFTDEIEKLKHDKEQLLVELQKYQHEWQTYEIQIHCSKDRLEKLEQNQQRMVSSVSHVLQKPVISVNILPLTETMDRKRRLPRSGLFYDEASIEDAIETSQMLPRENAENTTVLALNVERLDQLESSMAFWEAIVHDIGDTFVQIQSNTDFDESTICADSPSISCAQLDVEVRPKSSGIDMNSEPTTAAVPEPVASKEQPAGTTVAATGVNDVFWEQFLTEDPGASETQEVQSERKDYDGRKNEGKPSDLNKFWWNKRNANNLPEQMGHVSQAEKT 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo67g00023 402 MobiDBLite consensus disorder prediction 380 402 - -
Pumo67g00023 402 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 6 223 IPR027725 -
Pumo67g00023 402 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pumo67g00023 402 FunFam Heat shock transcription factor 1 7 104 - -
Pumo67g00023 402 MobiDBLite consensus disorder prediction 354 374 - -
Pumo67g00023 402 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pumo67g00023 402 SUPERFAMILY "Winged helix" DNA-binding domain 9 103 IPR036390 -
Pumo67g00023 402 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pumo67g00023 402 MobiDBLite consensus disorder prediction 346 402 - -
Pumo67g00023 402 Gene3D - 6 104 IPR036388 -
Pumo67g00023 402 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pumo67g00023 402 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pumo67g00023 402 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pumo67g00023 402 MobiDBLite consensus disorder prediction 302 328 - -
Pumo67g00023 402 Coils Coil 125 152 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo67g00023 7 402 HSF AT4G18880 52.580 9.34e-125 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pumo67g00023 HSF_DNA-bind 1.2e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo67g00023 K09419 - gmx:100798004 779.63