Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo67g00022 ATGAAGTGGGGTGGAAAAAAACCTTCTTCTTCTTCTTCTAGGCCTTCTTCTTTCATATCTCATGTATCCCCTTTTTCATGGCTTTCCAAGTTCAAGCAGATGAGAATCAACTCAGAACCAAAACCTGGCACACTGAAGCAGAATGCAAGGCAGAATTCAACTCCATCTGATAATGGTTCACCCCATTATGCTCGTGGGAATAGAGGCAGGTTTTATGGAGGGGATGATGAGGCTTTCTGGAGACTCTCATTTGGTGAAGAGAGTAATGAGCATAGAAAAAGTGAAGATATTCTGAAATCAGTTAAGTACAATTTGGATGCTCAGTATGTCATTCCATCCTCAAGTTTCCCCAGTGGACTGAATAATGCTAGAAGACAAGGTAGAAAAGAAGGCACTCAGAAGATGAAGCAGAAGGACACTGGACTGAGAGAAGAAACAAAATTGCTGAATGAAGCAGCAAAGAGTGTAAAGGAACTTGAATCCTTAAGAAGGAGATATGATAGGAAAGCACAAAGAGTTTTGCAAGAGCAGCTCTTGAAATTGGAAAAGGCAGAAGAGGAAGCTGAGTTTGCATCAAGTCCATTCTTAGAAAATGATGTGCTGCAATTTGAGTCACCAAGAACAATTTGCACGCCTAGAAAGCATTTGTTTGTAGATTCAAAGAGTTCTGGCCTTGGAAGCCTCAGAGAAGCTCGTGTGTGTAGTCCCGAATTGGGTTCTGAGTGGCATAATTTGAAACAAACTGAAGGGTTGAAATTGAAACCAAAGAGTAACCAACAAAGGCAATCTCTTCATGTGAGCAGAGAAAACCAGAGGAGGAAACCAAAGCACAACTCCAAGGTTAGAGTATATTCTCCAAGGATGGGTTCCAAGGTTGAAGTCCGCAAAATAAAGGCCATGGAAGAGAAGAAGAAAGCAAAACTGAAGATGAAGAAAGAAGAGGAGATTGTGGAGGAAACAGAAGAAGGGTTAGATAGCTTTGCTGTGGTGAAATGTTCTTTGGATCCCCAGAAAGATTTCAGAGATTCAATGATTGAGATGATCACAGAGAAACGGATCAGCGAGCCAGAAGAAATGGAAGATCTGCTAGCATGTTATCTGACTTTGAATTCCAATGAGTACCATGATCTCATCATCGAAGTGTTCAGGCAAGTATGGTTGTGCATGAGCCAAGCCAGTTCCGGTATTCAATCAGACAAGCAATGTTGCTGTTGTGATTAA 1221 0.4144 MKWGGKKPSSSSSRPSSFISHVSPFSWLSKFKQMRINSEPKPGTLKQNARQNSTPSDNGSPHYARGNRGRFYGGDDEAFWRLSFGEESNEHRKSEDILKSVKYNLDAQYVIPSSSFPSGLNNARRQGRKEGTQKMKQKDTGLREETKLLNEAAKSVKELESLRRRYDRKAQRVLQEQLLKLEKAEEEAEFASSPFLENDVLQFESPRTICTPRKHLFVDSKSSGLGSLREARVCSPELGSEWHNLKQTEGLKLKPKSNQQRQSLHVSRENQRRKPKHNSKVRVYSPRMGSKVEVRKIKAMEEKKKAKLKMKKEEEIVEETEEGLDSFAVVKCSLDPQKDFRDSMIEMITEKRISEPEEMEDLLACYLTLNSNEYHDLIIEVFRQVWLCMSQASSGIQSDKQCCCCD 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo67g00022 406 Coils Coil 142 187 - -
Pumo67g00022 406 ProSiteProfiles OVATE domain profile. 329 388 IPR006458 -
Pumo67g00022 406 Pfam Transcriptional repressor, ovate 333 389 IPR006458 -
Pumo67g00022 406 MobiDBLite consensus disorder prediction 36 70 - -
Pumo67g00022 406 MobiDBLite consensus disorder prediction 1 20 - -
Pumo67g00022 406 MobiDBLite consensus disorder prediction 114 140 - -
Pumo67g00022 406 NCBIfam uncharacterized plant-specific domain TIGR01568 328 389 IPR006458 -
Pumo67g00022 406 MobiDBLite consensus disorder prediction 246 280 - -
Pumo67g00022 406 MobiDBLite consensus disorder prediction 40 61 - -
Pumo67g00022 406 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 169 390 IPR038933 GO:0045892
Pumo67g00022 406 Coils Coil 296 323 - -
Pumo67g00022 406 MobiDBLite consensus disorder prediction 251 265 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo67g00022 Ovate 4.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo67g00022 - - gmx:106798868 639.032