Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo67g00021 ATGATCATGGAGGAGGAAGGGTGTTTAGGATCAATAGTTGAGGTGCTGCGATTTGGCCACACAACTGAGGCAAGGGAGAATGCTGCTGCAACATTGTTCAGCCTCTCTGCTGTCCATGATTATAAGAAACGAATTGCGGATAATGTTGGAGCTGTTGAAGCACTGGCTTGGTTGTTGCAAGAGGGGACTCACAGAGGAAAAAAGGATGCAGTCACAGCATTGTTTAATCTCTCCACTCACACTGAGAATTGTTTGAGAATGATAGAGGCAGGGGCAGTGAAAGCTATGGTTGTGGCTTTGGGGAATGAAGGAGTTGCTGAGGAGGCAGCTGGTGCCTTGGCCTTGATTGTTCGGCAGCCTGTTGGCACCATGGCGGTGGTGAGGGAGGAAGCAGCCATAGCCGGATTGATAGGAATGATGCGCTGTGGAACGCCAAGAGGTAAAGAGAATGCAGTTGCAGCATTGTTGGAGCTGTGCAGGAGTGGTGGTGCTGCTGCAACTGAGAGGGTGGTTAGGGCACCGGCTTTGGCCGGATTGCTTCAAACCTTGCTTTTCACAGGGACAAAGAGGGCAAGAAGAAAGGCAGCTTCACTTGCTAGAGTGTTTCAGAGATGTGAAAATGCATCTCTACATTATGGTGGATTAGGTGTAGGTTATGCATTTGCTAGCGATTCAGCTTCAACCAGGAATACTACAAGATTTGTGAGTGATGTTTCACTTCCAATGTCCATTTCTGTTCCTGTTTTATAG 750 0.4813 MIMEEEGCLGSIVEVLRFGHTTEARENAAATLFSLSAVHDYKKRIADNVGAVEALAWLLQEGTHRGKKDAVTALFNLSTHTENCLRMIEAGAVKAMVVALGNEGVAEEAAGALALIVRQPVGTMAVVREEAAIAGLIGMMRCGTPRGKENAVAALLELCRSGGAAATERVVRAPALAGLLQTLLFTGTKRARRKAASLARVFQRCENASLHYGGLGVGYAFASDSASTRNTTRFVSDVSLPMSISVPVL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo67g00021 249 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 50 92 IPR000225 GO:0005515
Pumo67g00021 249 SMART arm_5 39 79 IPR000225 GO:0005515
Pumo67g00021 249 SMART arm_5 80 118 IPR000225 GO:0005515
Pumo67g00021 249 PANTHER U BOX DOMAIN-CONTAINING 3 205 - -
Pumo67g00021 249 Gene3D - 1 102 IPR011989 -
Pumo67g00021 249 FunFam RING-type E3 ubiquitin transferase 21 206 - -
Pumo67g00021 249 SUPERFAMILY ARM repeat 5 198 IPR016024 -
Pumo67g00021 249 Gene3D - 103 212 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo67g00021 2 249 U-box Gene Family AT1G29340 70.400 2.07e-99 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo67g00021 - - gmx:100797462 441.039