Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo67g00004 ATGGATAGTAAGTTCAGAAAAAACAACCGCAACAACTCATATATCAATGAACAAGAAGACACTGATGTAGCTCAAGAAAACATTGCCGAGTCCCCTCCTTCTTCCACTGTGTTCAACATCGATGGCTTAGTCCCCTCCCCCACTTCTTCATCAAAGAGAAGGAGGGCAATACAGAAAAGGGTGGTGCAAATCCCAATCAAGGAGACAGAAGGGTGTAGGCTAAAAGGAGAGAGCAACACCCCACCCTCGGATTCATGGGCATGGAGAAAGTATGGCCAGAAACCCATCAAGGGTTCCCCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCGAAGGGATGTCCGGCACGGAAACAAGTGGAAAGGAGCTGCGTGGACCCCACAATGCTAGTCGTCACTTACTCCTCCGACCACAACCATCCCTGGCCACCTTCTAGAAACCACGCCAGACCCACCAAAAAGCCCGAACCGGAACCCCTTCAGGACCCGGTCGAACCGGAACCCGAACCGGAGGAGAAGTTCGCGGACCTGGGCGGGGACGAGTCAATGATAACCACCGCGGAGGAATTGGGGTGGCTGGGGGAGATGGAAACGACGTCGTCGACGGTTCTCGAAAGCCCGATTATGGCCACGGGGTACCATGCTGCTGACGTGGCGCTGATTCCGATGAGGGAAGAGGACGAGTCGCTCTTCGCCGACCTCGGGGAGCTGCCGGAGTGCTCGGTTGTGTTCCGGCAGGGACTGCTGGCGGAGCGGCGGACGGTACTACCGCTCCGTGGTGTGGGACCACAAGTTGAGGGCAAAAAAGTCAATACAAGAAAAAAAGGAAAAAGAAAAAAACAACTAGAGGTGCCTGTTTGA 861 0.5412 MDSKFRKNNRNNSYINEQEDTDVAQENIAESPPSSTVFNIDGLVPSPTSSSKRRRAIQKRVVQIPIKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCVDPTMLVVTYSSDHNHPWPPSRNHARPTKKPEPEPLQDPVEPEPEPEEKFADLGGDESMITTAEELGWLGEMETTSSTVLESPIMATGYHAADVALIPMREEDESLFADLGELPECSVVFRQGLLAERRTVLPLRGVGPQVEGKKVNTRKKGKRKKQLEVPV 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo67g00004 286 MobiDBLite consensus disorder prediction 8 52 - -
Pumo67g00004 286 MobiDBLite consensus disorder prediction 1 58 - -
Pumo67g00004 286 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 23 242 IPR044810 GO:0003700
Pumo67g00004 286 MobiDBLite consensus disorder prediction 135 179 - -
Pumo67g00004 286 Pfam WRKY DNA -binding domain 84 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo67g00004 286 ProSiteProfiles WRKY domain profile. 83 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo67g00004 286 SUPERFAMILY WRKY DNA-binding domain 80 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo67g00004 286 MobiDBLite consensus disorder prediction 149 178 - -
Pumo67g00004 286 SMART WRKY_cls 82 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo67g00004 286 Gene3D WRKY domain 71 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo67g00004 286 MobiDBLite consensus disorder prediction 262 286 - -
Pumo67g00004 286 FunFam WRKY transcription factor 65 59 143 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo67g00004 20 266 WRKY Transcription Factor Family AT1G29280 56.420 9.78e-81 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo67g00004 WRKY 6.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo67g00004 - - gmx:100127392 454.907