Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo65g00024 ATGCGTTACATCGATCCGAATCAATCTGGTTCAAAAATTCAGTTTAAAGCCCAATATGAAAATTTCATTGGTGGTCAGTGGGTATCCCCTGTAAAAGGTCAGTACTTTGACAACATCTCTCCTGTCGATGGCAAAGCATTCACTAAAATTCCACGCTCAAGTGCCGAAGATATTGAACTTGCACTGGATGCAGCCCATAAAGCCAAAGCACAATGGAATAAATCTTCACCAACAACTCGCTCGAACCTCTTATTAAAAATTGCAGACCGCTTAGAAGCGAATTTAGAAATACTAGCCGTTGCTGAAACTTGGGATAATGGCAAACCTGTCCGTGAAACTTTAGCTGCGGATATTCCTTTAGCAATTGACCATTTTCGTTATTTTGCAGGGTGCATCCGCGCACAAGAAGGTGGCATTTCAGAAATTGATGAACATACTATTGCCTATCATTTCCATGAACCACTAGGCGTTGTTGGGCAAATTATCCCATGGAACTTCCCAATTCTGATGGCAGCGTGGAAATTAGCCCCTGCTTTGGCAGCAGGCAATTGTGTTGTGTTAAAACCAGCAGAACAAACCCCTGTTGGCATTTTATTGGTCGCTGAACTTATTCAAGATTTACTGCCTGAAGGCGTCCTCAATATCGTAAATGGTTATGGCGCGGAAGTGGGTCGTCCACTGGCAACCAGCCCACGTATTGCCAAAATTGCCTTTACGGGTTCAACGGCTGTTGGTCAGCAAATTATGCAATATGCAACTGACAATATTATTCCTGTCACGCTTGAACTGGGTGGTAAGTCGCCTAACCTGTTCTTTGAAGATGTTATGGCACAAGAAGATGACTTTTTAGATAAAACACTTGAAGGTTTTGCCATGTTCGCCTTAAACCAAGGTGAAATTTGTACCTGCCCTTCACGCGCATTGGTTCAAGAAAGCATTGCCGATCAATTTTTAGAAAAAGCCATTGAACGCGTAAAACGCATTAAAACAGGGCATCCACTCGATACAGAAACCATGATTGGTGCACAAGCATCTCAACAACAATACAATAAAATTTTAGGTTGTATTGAGACAGGTCGTAATGAAGGTGCTCAAGTGCTTACAGGTGGCGGTAAACGTCATGAAGTTGGTGAAGGATTCTATATTGAACCTACCATTTTCAAAGGCAACAATGACATGCAAATTTTCCAAGAAGAAATTTTTGGACCTGTCCTTGCGGTAACTACATTTAAAGACTTCGATGATGCCATTAAAATTGCCAATGACACCATTTATGGTTTAGGTGCAGGGGTTTGGTCACGTTCAGCACACACCTCTTACCGTGCAGGTCGTGCGATTCAAGCTGGGCGCGTCTGGACAAACTGTTACAACCTTTACCCTGCTCATGCGGCATTTGGTGGTTATAAAAAATCAGGTATTGGACGTGAAAACCATAAAATGATGCTAGATCACTACCAACAAACCAAAAACTTGTTGGTCAGCTACGACACAAAACCAATGGGCTTTTTCTAA 1512 0.4233 MRYIDPNQSGSKIQFKAQYENFIGGQWVSPVKGQYFDNISPVDGKAFTKIPRSSAEDIELALDAAHKAKAQWNKSSPTTRSNLLLKIADRLEANLEILAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGGISEIDEHTIAYHFHEPLGVVGQIIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPVGILLVAELIQDLLPEGVLNIVNGYGAEVGRPLATSPRIAKIAFTGSTAVGQQIMQYATDNIIPVTLELGGKSPNLFFEDVMAQEDDFLDKTLEGFAMFALNQGEICTCPSRALVQESIADQFLEKAIERVKRIKTGHPLDTETMIGAQASQQQYNKILGCIETGRNEGAQVLTGGGKRHEVGEGFYIEPTIFKGNNDMQIFQEEIFGPVLAVTTFKDFDDAIKIANDTIYGLGAGVWSRSAHTSYRAGRAIQAGRVWTNCYNLYPAHAAFGGYKKSGIGRENHKMMLDHYQQTKNLLVSYDTKPMGFF 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo65g00024 503 Pfam Aldehyde dehydrogenase family 27 490 IPR015590 GO:0016491
Pumo65g00024 503 CDD ALDH_ACDHII_AcoD-like 19 495 - -
Pumo65g00024 503 PANTHER ALDEHYDE DEHYDROGENASE B-RELATED 11 503 - -
Pumo65g00024 503 FunFam Aldehyde dehydrogenase 1 31 274 - -
Pumo65g00024 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 265 464 IPR016163 GO:0016620
Pumo65g00024 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 261 268 IPR029510 GO:0016491
Pumo65g00024 503 SUPERFAMILY ALDH-like 13 494 IPR016161 GO:0016491
Pumo65g00024 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Pumo65g00024 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 294 305 IPR016160 GO:0016491
Pumo65g00024 503 FunFam Betaine aldehyde dehydrogenase 265 460 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo65g00024 22 499 Aldehyde Dehydrogenase Gene Family AT3G48000 42.593 2.55e-122 367