Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo64g00007 | ATGCCCAATGGTAGTCTGGGGGATTTGTTGCATAGCAATAAAGGAGGGTTGTTGGATTGGCCAACTAGGTATAAGATAGCTGTTGATGCTGCAGAAGGCCTCTCTTATTTGCATCATGACTGTGTTCCTTCAATTGTTCACAGAGATGTGAAATCTAACAACATCTTGTTGGATGGAGACTTTGGTGCAAGGGTGGCGGATTTTGGAGTAGCTAAGGTAGTTGATGCCACCGGGAAAGGAACTAAATCCATGTCTGTCATAGCTGGATCTTGTGGGTACATTGCACCAGAATATGCATACACGCTTAGAGTGAATGAGAAGAGTGACATATATAGTTTTGGTGTTGTCATACTTGAGTTGGTTACTGGAAGGAGGCCCATAGACCCTGAATTTGGGGAAAAAGACTTGGTTATGTGGGCGTGCAACACCTTGGATCAGAAAGGCGTTGACCACGTGATCGACTCCAGGCTTTATTCATGTTTCAAAGAAGAAATTTGCAAGGTCCTCAATATTGGCCTAATGTGCACTAGTCCTCTTCCAATCAACCGGCCTGCAATGAGAAGAGTGGTGAAGATGTTACAAGAGGTGGGCACAGAGAACCCAACAAAACCTGCCAAGAAAGATGGGAAGTTGTCCCCTTATTACTATGACGATGGGTCAGATCATGGAAGTGTTGCTTAG | 681 | 0.4464 | MPNGSLGDLLHSNKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDATGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPIDPEFGEKDLVMWACNTLDQKGVDHVIDSRLYSCFKEEICKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGTENPTKPAKKDGKLSPYYYDDGSDHGSVA | 226 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo64g00007 | 226 | PIRSF | ILK | 1 | 209 | - | - | |
| Pumo64g00007 | 226 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 45 | 57 | IPR008271 | GO:0004672|GO:0006468 | |
| Pumo64g00007 | 226 | Pfam | Protein kinase domain | 1 | 132 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pumo64g00007 | 226 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 217 | - | - | |
| Pumo64g00007 | 226 | MobiDBLite | consensus disorder prediction | 197 | 226 | - | - | |
| Pumo64g00007 | 226 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase | 1 | 210 | - | - | |
| Pumo64g00007 | 226 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 1 | 195 | - | - | |
| Pumo64g00007 | 226 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 194 | IPR011009 | - | |
| Pumo64g00007 | 226 | SMART | serkin_6 | 1 | 215 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pumo64g00007 | 226 | MobiDBLite | consensus disorder prediction | 201 | 215 | - | - | |
| Pumo64g00007 | 226 | ProSiteProfiles | Protein kinase domain profile. | 1 | 196 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pumo64g00007 | 1 | 226 | Receptor kinase-like Gene Family | AT1G28440 | 76.957 | 2.19e-123 | 371 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_LRR-XI-1 | Pumo64g00007 | Pkinase | 7.5e-25 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo64g00007 | - | - | gmx:100776936 | 459.529 |