Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo62g00001 ATGGAAGCCCCTCCTTTCTCGATGACCATTAGGCAAAATCAAGCTCTGATGACACACGCACCTTGGAATGTGGCTGTGCAGGAAAATGATCACTCCATGCCCATTATGAATTTGGTGAGGATTAAGCGGAAGGTGCTTCTGCCACAAGCAAAAGTCACTATAGAAGCCAAGAAAACAATGCAACTATACTTGTCAGAGTTCACAAGCTTGATCACCTGCGAGGCCAACTAG 231 0.4589 MEAPPFSMTIRQNQALMTHAPWNVAVQENDHSMPIMNLVRIKRKVLLPQAKVTIEAKKTMQLYLSEFTSLITCEAN 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo62g00001 76 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 23 76 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pumo62g00001 76 SUPERFAMILY Histone-fold 30 76 IPR009072 GO:0046982
Pumo62g00001 76 Gene3D Histone, subunit A 22 76 IPR009072 GO:0046982
Pumo62g00001 76 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 32 76 IPR003958 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo62g00001 11 76 CCAAT-HAP3 Transcription Factor Family AT1G21970 42.424 1.33e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo62g00001 - K19496 ptr:455788 33.113