Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03996 ATGGCTTCTCCCAACCAGTCCCGCATGATCATTCTGCTCTTGTTGATGACAGCCTCAGCTTGGGAAGCAGAAAAGAAGACAACATTCATAGTGCAAGTCCAGCACGAAGCTAAGCCTTCCATCTTCCCAACGCACAGGAACTGGTACGAGTCTTCCCTTGCCGACACTACCGCCTCCATAATCCACACCTACGACACAGTCTTCCACGGATTCTCAGCAAGGCTCTCACCCCCCGAGGCACACAAGCTCCAATCACTCTCCCACGTCATAACCCTCATCCCAGAGCAGGTGCGCCAACTCCACACCACGCGCTCCCCTCAGTTCTTGGGCCTCAACACTGCCGACAGAGCCGGCTTACTCAAGGAGACCGACTTCGGCTCCGATCTCGTTATCGGACTCATCGACACCGGCATTTCCCCCGACAGCCAGAGCTTCAACGACCGCGATCTCGGTCTCCCTCCCCCTAAGTCGAAGGGCCACTGCGTCCCCCCCACCTCCTGTAACAGGAAACTCATCGGAGCCCGCTACTTCTGCGCCGGCTACGAAGCCACCAACGGCAAAATGAACGACACCTTCGAGTATCGTTCTCCCAGAGACTCCGACGGTCACGGAACCCACACCGCTTCCATCGCCGCCGGCAGGTACGTCTTCCCGGCCTCCACCATGGGCTACGCCAAAGGAATGGCCGCCGGGATGGCTCCCAAGGCTCGCCTCGCCGTCTACAAGGTCTGCTGGAACGCCGGCTGCTACGACTCCGACATCCTCGCCGCATTCGACGCCGCCGTGGCCGACGGCGTCGACGTGGTCTCCCTCAGCGTCGGGGGCGTGGTGGTGCCCTACCACCTCGACGTCATCGCCGTTGGGGCCTTCGGAGCCTCCGAGGCTGGCGTCTTCGTGTCTGCCTCCGCCGGCAACGGCGGTCCGGGAGGGCTCACGGTGACCAATGTGGCACCCTGGGTGACGACTGTGGGCGCGGGGACCATAGACAGAGACTTCCCGGCGGATGTTATGCTGGGGAATGGGAAGGTGATTGGTGGGGTGAGTGTGTACGGTGGGCCGGGTCTGACTCCGGGTCGGCTGTACCCGCTCGTGTATGCTGGTTCGGATGGTTACTCCTCCTCTCTTTGCTTGGAAGATTCGTTGGATCCCAAGTCTGTAGAGGGGAAGATTGTTGTGTGTGACAGAGGCGTCAATTCAAGAGCTGCCAAAGGTGAAGTGGTGAAGAAAGCGGGAGGAGTTGGCATGATTTTGACGAATGGACCCTTCGACGGTGAAGGTTTGGTGGCTGACTGCCACGTCCTCCCTGCCACCTCCGTGGGTGCTGCTGGCGGCGACGAGATTCGGAGATACATCTCTTTCGCTTCACAGCTACGCTCACCACCCACGGCAACCATCATATTTAAGGGCACCAGGCTTGGGATTAAACCAGCGCCAAAGGTGGCATCTTTTTCCGCCAGGGGGCCTAATCCTGAATCCCCTGAGATTCTGAAGCCCGATGTCATAGCTCCCGGGTTGAACATTCTTGCGGCTTGGCCTACTACAGTTGCCCCTTCTGGTGTTCCCTCTGATAACCGTAGGACTGAGTTTAACATACTTTCGGGTACTTCAATGGCTTGTCCACACGTTTCTGGTTTGGCTGCTCTGTTGAAAGCCGCGCACCCGGATTGGAGTCCTGCTGCCATCAGATCTGCCCTCATCACCACTGCTTACACTGTGGACAATGCAGGAGGAGCAGGAGGAGAGGCTATGTTGGATGAATCTAATGGCAATGTTTCCTCCGTCTTTGATTATGGGGCTGGCCATGTTCATCCCGAGAAGGCCATCAACCCTGGCCTCATTTATGACATCTCTACCTATGATTATGTGGATTTCTTGTGCAATTCCAATTATACCGCTCACAATATCCGAGTTATTACCAGAAAGCAGGATGCAGACTGCAGTGGGGCAAAGAGGGCTGGTCACGCTGGGAATCTCAATTACCCCTCTTTATCTGCCGTTTTTCAACAATATGGAAAGCAACACATGTCCACACACTTCATTAGAACTGTCACCAACGTTGGAGACCCCAACTCGGTTTACAAGGTCACTATTGCACCCCCTGCGGGCACCGAGGTCACCGTCGAACCAGACACATTAGCTTTCAGGAGGTTGGGTCAGAAATTGAACTTCCTTGTTAGGGTGCAAACCAGGGCAGTTAAGCTTTCCCCTGGGAGTTCTACTGTCAAGACTGGTTCCATTGTTTGGTCTGATGCCAAGCACACTGTCACAAGTCCCTTGGTTGTCACCATGCAGCAACCTCTCTAA 2304 0.5608 MASPNQSRMIILLLLMTASAWEAEKKTTFIVQVQHEAKPSIFPTHRNWYESSLADTTASIIHTYDTVFHGFSARLSPPEAHKLQSLSHVITLIPEQVRQLHTTRSPQFLGLNTADRAGLLKETDFGSDLVIGLIDTGISPDSQSFNDRDLGLPPPKSKGHCVPPTSCNRKLIGARYFCAGYEATNGKMNDTFEYRSPRDSDGHGTHTASIAAGRYVFPASTMGYAKGMAAGMAPKARLAVYKVCWNAGCYDSDILAAFDAAVADGVDVVSLSVGGVVVPYHLDVIAVGAFGASEAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVMLGNGKVIGGVSVYGGPGLTPGRLYPLVYAGSDGYSSSLCLEDSLDPKSVEGKIVVCDRGVNSRAAKGEVVKKAGGVGMILTNGPFDGEGLVADCHVLPATSVGAAGGDEIRRYISFASQLRSPPTATIIFKGTRLGIKPAPKVASFSARGPNPESPEILKPDVIAPGLNILAAWPTTVAPSGVPSDNRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALITTAYTVDNAGGAGGEAMLDESNGNVSSVFDYGAGHVHPEKAINPGLIYDISTYDYVDFLCNSNYTAHNIRVITRKQDADCSGAKRAGHAGNLNYPSLSAVFQQYGKQHMSTHFIRTVTNVGDPNSVYKVTIAPPAGTEVTVEPDTLAFRRLGQKLNFLVRVQTRAVKLSPGSSTVKTGSIVWSDAKHTVTSPLVVTMQQPL 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03996 767 SUPERFAMILY Subtilisin-like 100 612 IPR036852 GO:0004252|GO:0006508
Pumo5g03996 767 Gene3D Peptidase S8/S53 domain 128 621 IPR036852 GO:0004252|GO:0006508
Pumo5g03996 767 Pfam Fibronectin type-III domain 657 761 IPR041469 -
Pumo5g03996 767 Pfam PA domain 361 447 IPR003137 -
Pumo5g03996 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 52 761 IPR045051 -
Pumo5g03996 767 FunFam subtilisin-like protease SBT1.5 329 472 - -
Pumo5g03996 767 FunFam Subtilisin-like protease SBT1.9 17 101 - -
Pumo5g03996 767 CDD Peptidases_S8_3 99 570 IPR034197 -
Pumo5g03996 767 Gene3D - 329 473 - -
Pumo5g03996 767 SUPERFAMILY PA domain 361 445 IPR046450 -
Pumo5g03996 767 Gene3D - 625 764 - -
Pumo5g03996 767 ProSiteProfiles Serine proteases, subtilase domain profile. 105 608 - -
Pumo5g03996 767 CDD PA_subtilisin_like 338 465 - -
Pumo5g03996 767 FunFam Subtilisin-like protease SBT1.5 625 764 - -
Pumo5g03996 767 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 131 141 IPR023827 -
Pumo5g03996 767 Pfam Subtilase family 126 578 IPR000209 GO:0006508|GO:0008236
Pumo5g03996 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 101 IPR037045 -
Pumo5g03996 767 FunFam Subtilisin-like protease SBT1.5 128 340 - -
Pumo5g03996 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Pumo5g03996 767 Pfam Peptidase inhibitor I9 28 101 IPR010259 -
Pumo5g03996 767 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Pumo5g03996 767 PRINTS Subtilisin serine protease family (S8) signature 199 212 IPR015500 -
Pumo5g03996 767 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03996 Pumo-Chr5 90259137 90261991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03996 28 767 Subtilisin-like Serine Gene Family AT3G14240 76.393 0.0 1160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03996 - - gmx:100784180 1375.53