Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03995 ATGTGGTGGAGATCAGCATCATTCATCATGGACAGGCAGCAGAACGAGGAGGCTGCTCTGAAGGGGGCTCCAAACCCTAACCCTAACCCTAAGATCTCTGCCTACTATGAGACTAGAGCGGCGCACCACGGCGTGGTCACGAGCGACTGGCTGGCCCAGGCTCAGGCCGCGATTGGGCCCGACCCTGAACCTCAACCTCAACCTCAACCTCAAATCAGGCCCGATCCTGACAAGCCCTTCAGTGTGATCGAGGAGTTTAACAACTGGCGGAAACAGCCCCATTTGGCGGAGGCGGTGGCCGCCATTCGCGCCTTGGCCGCCGTGATAAGGTCCAGCGAGGCTAGCACCATGATGCAGCTGGAAATGGAGCTGAAGAATGCCTCGGATTCTCTAAAGTCTTGGGATTCGACCTCTATCTCTTTGACAGCTGGCTGTGATCTCTTTATGCGATATGTCACTCGTACTTCTGCTTTAGAATACGAAGACTTCAATTCCGCTAAATCTCGCTTGATTGAGCGTGCTGAGAAGTTTGGGGAAATCTCCTACAAGGCCCGCAAAGTTATTGCAATGTTGAGTCAGGATTTTATATTTGATGGTTGTACAATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTTGAAGTCCTAAAACTCGCTGCACAAAATAAAAAACTATTTCGGGTCTTCTGCACAGAGGGAAGACCAGACCGAACAGGTTTGCGGTTGTCCAATGAGCTGGCCAAGCTTGATGTTCCAGTGAAACTTCTAGTAGATTCTGCTGTTGCATATACTATGGATGAGGTGGACATGGTTTTTGTGGGTGCAGATGGAGTTGTCGAAAGTGGGGGCATAATCAACATGATGGGGACCTATCAAGTAGCATTGGTTGCACACAGTATGAATAAACCAGTTTATGTCGCTGCTGAGAGCTACAAGTTTGCTCGTCTTTACCCTCTTGACCAAAAGGATTTAGCTCCTGCGTTACGCCCTATTGATTTTGGCGTACCTATTCCATCCAAGGTTGAGGTTGAAAGGTCCGCGCGGGACTACACCCCTCCTCAATACCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCTGTCGTTAGTGATGAGCTCATCCAGCTATATTTATAG 1140 0.4886 MWWRSASFIMDRQQNEEAALKGAPNPNPNPKISAYYETRAAHHGVVTSDWLAQAQAAIGPDPEPQPQPQPQIRPDPDKPFSVIEEFNNWRKQPHLAEAVAAIRALAAVIRSSEASTMMQLEMELKNASDSLKSWDSTSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKVIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLVDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQVALVAHSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03995 379 Gene3D - 182 379 IPR042529 -
Pumo5g03995 379 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 42 379 - -
Pumo5g03995 379 Coils Coil 117 137 - -
Pumo5g03995 379 FunFam Translation initiation factor eIF-2B subunit alpha 183 379 - -
Pumo5g03995 379 MobiDBLite consensus disorder prediction 61 75 - -
Pumo5g03995 379 Pfam Initiation factor 2 subunit family 94 367 IPR000649 GO:0044237
Pumo5g03995 379 SUPERFAMILY NagB/RpiA/CoA transferase-like 94 378 IPR037171 -
Pumo5g03995 379 Gene3D - 78 180 IPR042528 -
Pumo5g03995 379 MobiDBLite consensus disorder prediction 58 79 - -
Pumo5g03995 379 FunFam Translation initiation factor eIF-2B subunit alpha 78 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03995 Pumo-Chr5 90250717 90253124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03995 1 379 Eukaryotic Initiation Factors Gene Family AT1G53880 77.638 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03995 K03239 - gmx:100799015 674.855