Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03982 ATGGTGGACTTTCAAAGGTTGTTGCTGTGCATCACTACCTGCATTCTTTGTTGGATGCCCAATGTTGCCACTGCCGCCACAGATCCAAATGATGCTGCTGCTGTGAGATTATTGTTTCAAAATTTGAACTCACCATCCCAGCTAGGTTGGCCTGCTAATGGTGATGATCCATGTGGACAATCTTGGAAAGGCATTACTTGCTCAGGCAACCGTGTTACAGAGATTAAGTTATCTAATCTTGGACTAACTGGATCATTGCCTTACGGATTACAAGTCTTGTCATCTTTGACCAACCTAGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCCATATGTGCAGCGCTTAAATCTTGCTTATAATAACATCACAGGGACAGTCCCTTATTCTATTTCTAACTTGACCGCTCTTACAGACCTGAATCTTGGTCACAATCAGCTCCAGCAAGGACTGGGGGTTGACTTTCTTAATCTTTCTACCCTCTCCACATTGGATCTCTCCTTCAATTCTCTAACAGGTGACCTCCCTCAGACTATGAGCTCACTTTCACGCATAACCACCATGTATTTGCAAAATAACCAGTTTACAGGCACTATTGATGTCCTTGCTAATCTGCCTCTGGATAATCTGAATGTGGAAAACAATAATTTTACAGGATGGATACCGGAACAGTTGAAGAACATAAACCTACAGACTGGTGGTAATGCATGGAGCTCTGGTCCTGCACCGCCACCTCCTCCCGGGACACCTCCAGCACCTAAAAGCAACCAGCACCACAAGTCTGGTGGTGGAAGCACCAGCCCCTCAGATACTGGAAGTGGCAACAGCTCAATTGACAAGGGCAAAAAATCTGGTATAGGAGGTGGTGCCATAGCTGGAATTGCGATCTCTGTCATAGTTGTGGGGGCAATAGTAGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGTCATCTTCAGATTTAGAAAAGCAGGACAATCAGTCCTTTGCTCCACTTCCTTCAAATGAAGTGCATGAAGAAAAGTCTGTGCAATCTTCCTCTGTAACTGACTTGAAGACATTTGATACTTCTGCCTCAATAAATCTTAAACCCCCACCTATTGATCGTCATAAATCATTTGATGATGAAGAATTCTCCAAGAAGCCCACAATTGTGAAGAAGACTGTAACAGCTCCTGCAAATGTGAAATCATATTCTATTGCTGAACTGCAGATTGCTACTGGCAGCTTCAGTGTGGATCACCTTGTTGGTGAGGGGTCTTTTGGGCGTGTGTACCATGCTCAATTTGATGGACAGGTTCTTGCTGTGAAGAAGATAGATTCATCTGTCCTTCCCAATGATTTGACAGATGATTTTATAGAAATAATTTCAAACATCTCCAATTTACATCATCCAAATGTGACAGAGCTTGTAGGTTATTGCTCGGAGTATGGACAACACCTCTTGGTCTATGAGTTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTATCAGATGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTCTAGAGTACCTACATGAAGTTAGTTCACCATCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTACTCGATGCTGAGCTTAATCCTCATCTTTCGGATAGTGGATTGGCAAGTTATATTCCAAATGCTGACCAGATATTGAACCATAATGTTGGATCTGGATATGATGCACCTGAAGTTGCCTTGTCTGGTCAGTATACTTTGAAAAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAACTTCTCAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGATCTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCAATGAAAGGGCTATATCCTGTTAAGTCTCTTTCTCGATTTGCCGATGTTATTGCTCTTTGCGTTCAGCCGGAGCCTGAATTTCGACCACCAATGTCAGAAGTGGTTCAAGCACTGGTGCGATTAGTGCAGCGAGCTAACATGAGCAAGCGAACATTTAGTAGTAGTGATCATGGAGGATCCCAACGAGGGAGTGATGAGCCAGTTCTACGGGACATTTAA 2163 0.4318 MVDFQRLLLCITTCILCWMPNVATAATDPNDAAAVRLLFQNLNSPSQLGWPANGDDPCGQSWKGITCSGNRVTEIKLSNLGLTGSLPYGLQVLSSLTNLDMSSNSLGGSIPYQLPPYVQRLNLAYNNITGTVPYSISNLTALTDLNLGHNQLQQGLGVDFLNLSTLSTLDLSFNSLTGDLPQTMSSLSRITTMYLQNNQFTGTIDVLANLPLDNLNVENNNFTGWIPEQLKNINLQTGGNAWSSGPAPPPPPGTPPAPKSNQHHKSGGGSTSPSDTGSGNSSIDKGKKSGIGGGAIAGIAISVIVVGAIVAFFLVKRKSKKSSSDLEKQDNQSFAPLPSNEVHEEKSVQSSSVTDLKTFDTSASINLKPPPIDRHKSFDDEEFSKKPTIVKKTVTAPANVKSYSIAELQIATGSFSVDHLVGEGSFGRVYHAQFDGQVLAVKKIDSSVLPNDLTDDFIEIISNISNLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVSSPSVVHKNIKSANILLDAELNPHLSDSGLASYIPNADQILNHNVGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAMKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFSSSDHGGSQRGSDEPVLRDI 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03982 720 SUPERFAMILY Protein kinase-like (PK-like) 397 686 IPR011009 -
Pumo5g03982 720 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 379 491 - -
Pumo5g03982 720 MobiDBLite consensus disorder prediction 697 720 - -
Pumo5g03982 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 492 700 - -
Pumo5g03982 720 Gene3D Phosphorylase Kinase; domain 1 377 491 - -
Pumo5g03982 720 MobiDBLite consensus disorder prediction 259 285 - -
Pumo5g03982 720 MobiDBLite consensus disorder prediction 236 285 - -
Pumo5g03982 720 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Pumo5g03982 720 SUPERFAMILY L domain-like 27 232 - -
Pumo5g03982 720 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 690 IPR046959 -
Pumo5g03982 720 Pfam Protein tyrosine and serine/threonine kinase 418 686 IPR001245 GO:0004672|GO:0006468
Pumo5g03982 720 MobiDBLite consensus disorder prediction 321 354 - -
Pumo5g03982 720 ProSitePatterns Protein kinases ATP-binding region signature. 421 443 IPR017441 GO:0005524
Pumo5g03982 720 ProSiteProfiles Protein kinase domain profile. 415 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03982 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 28 253 - -
Pumo5g03982 720 MobiDBLite consensus disorder prediction 328 354 - -
Pumo5g03982 720 Gene3D Ribonuclease Inhibitor 179 244 IPR032675 -
Pumo5g03982 720 Gene3D Ribonuclease Inhibitor 33 178 IPR032675 -
Pumo5g03982 720 MobiDBLite consensus disorder prediction 244 258 - -
Pumo5g03982 720 Gene3D Transferase(Phosphotransferase) domain 1 493 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03982 Pumo-Chr5 90136523 90145758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03982 11 699 Strubbelig Receptor Gene Family AT1G53730 67.288 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pumo5g03982 PK_Tyr_Ser-Thr 4.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03982 - - gmx:100807707 1285.78