Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03976 ATGGCTTCCGCTTGTGCTTCCTCTGCCATTGCAGCTGTTGCAATCTCTACGCCAAGTTCCCAGAAGAATGGATCAACCCCAAAAGCTTGTTTTCTTAGTGGGAGGAAATTGAGGGTGAACAAGTCCACAGCAGCAGTTGGAGGACGATCCAGCAGCACTACAGTGTGTGCAGTAGCTGACCCTGACAGACCTCTCTGGTTCCCAGGCAGCACCCCTCCTCCATGGCTTGATGGCAGTCTCCCAGGAGACTTTGGCTTTGACCCTCTTGGTCTAGGATCTGATCCGGAGAGTCTGAGATGGAATGTTCAGGCAGAGATAGTGCACTGCAGATGGGCAATGTTGGGTGCTGCTGGCATTTTCATTCCAGAATTCCTAACAAAGATTGGTGTCTTAAACACCCCCTCATGGTACTCAGCTGGAGAACTGGAATACTTCACAGACACCACTACCCTCTTCATAGTTGAGCTCTTTTTCATTGGCTGGGCCGAGGGTAGAAGATGGGCTGACATAATCAAGCCAGGCTGTGTCAACACTGACCCTATCTTTCCCAACAACAAGCTCACCGGAACCGATGTTGGTTACCCAGGTGGGCTTTGGTTTGACCCCCTTGGATGGGGATCTGGTTCTCCTGAGAAGATCAAGGAGTTGAGAACTAAGGAGATCAAGAATGGCAGATTGGCCATGTTGGCTGTCATGGGTGCATGGTTCCAGCACATTTACACTGGCACCGGTCCTATTGACAACCTCTTTGCCCACCTTGCAGATCCTGGCCATGCTACCATTTTTGCTGTAAGTTTATTCTACACTCTCGTTTCCATTTTTATGGAATTGTTTATTGTTTATGCTGATTTTATCTTTATTTGA 864 0.4861 MASACASSAIAAVAISTPSSQKNGSTPKACFLSGRKLRVNKSTAAVGGRSSSTTVCAVADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYSAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAVSLFYTLVSIFMELFIVYADFIFI 287
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03976 287 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 15 264 IPR001344 GO:0009765|GO:0016020
Pumo5g03976 287 FunFam Chlorophyll a-b binding protein, chloroplastic 73 258 - -
Pumo5g03976 287 Gene3D Chlorophyll a/b binding protein domain 73 258 - -
Pumo5g03976 287 SUPERFAMILY Chlorophyll a-b binding protein 58 264 - -
Pumo5g03976 287 Pfam Chlorophyll A-B binding protein 72 238 IPR022796 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo5g03976 Pumo-Chr5 90070059 90071859 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03976 49 263 Chloroplast and Mitochondria Gene Families AT3G61470 88.372 7.28e-145 405
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03976 K08908 - gmx:100784089 505.368