LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g03976	ATGGCTTCCGCTTGTGCTTCCTCTGCCATTGCAGCTGTTGCAATCTCTACGCCAAGTTCCCAGAAGAATGGATCAACCCCAAAAGCTTGTTTTCTTAGTGGGAGGAAATTGAGGGTGAACAAGTCCACAGCAGCAGTTGGAGGACGATCCAGCAGCACTACAGTGTGTGCAGTAGCTGACCCTGACAGACCTCTCTGGTTCCCAGGCAGCACCCCTCCTCCATGGCTTGATGGCAGTCTCCCAGGAGACTTTGGCTTTGACCCTCTTGGTCTAGGATCTGATCCGGAGAGTCTGAGATGGAATGTTCAGGCAGAGATAGTGCACTGCAGATGGGCAATGTTGGGTGCTGCTGGCATTTTCATTCCAGAATTCCTAACAAAGATTGGTGTCTTAAACACCCCCTCATGGTACTCAGCTGGAGAACTGGAATACTTCACAGACACCACTACCCTCTTCATAGTTGAGCTCTTTTTCATTGGCTGGGCCGAGGGTAGAAGATGGGCTGACATAATCAAGCCAGGCTGTGTCAACACTGACCCTATCTTTCCCAACAACAAGCTCACCGGAACCGATGTTGGTTACCCAGGTGGGCTTTGGTTTGACCCCCTTGGATGGGGATCTGGTTCTCCTGAGAAGATCAAGGAGTTGAGAACTAAGGAGATCAAGAATGGCAGATTGGCCATGTTGGCTGTCATGGGTGCATGGTTCCAGCACATTTACACTGGCACCGGTCCTATTGACAACCTCTTTGCCCACCTTGCAGATCCTGGCCATGCTACCATTTTTGCTGTAAGTTTATTCTACACTCTCGTTTCCATTTTTATGGAATTGTTTATTGTTTATGCTGATTTTATCTTTATTTGA	864	0.4861	MASACASSAIAAVAISTPSSQKNGSTPKACFLSGRKLRVNKSTAAVGGRSSSTTVCAVADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYSAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAVSLFYTLVSIFMELFIVYADFIFI	287

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g03976	287	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	15	264	IPR001344	GO:0009765\|GO:0016020
	Pumo5g03976	287	FunFam	Chlorophyll a-b binding protein, chloroplastic	73	258	-	-
	Pumo5g03976	287	Gene3D	Chlorophyll a/b binding protein domain	73	258	-	-
	Pumo5g03976	287	SUPERFAMILY	Chlorophyll a-b binding protein	58	264	-	-
	Pumo5g03976	287	Pfam	Chlorophyll A-B binding protein	72	238	IPR022796	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo5g03976	Pumo-Chr5	90070059	90071859	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo5g03976	49	263	Chloroplast and Mitochondria Gene Families	AT3G61470	88.372	7.28e-145	405

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g03976	K08908		-	gmx:100784089	505.368

Showing 1 to 1 of 1 entries