Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo5g03965 | ATGGTCAAATTGCTTCTCGACCAGGTCTTCTACAAAAGCTGGGGTGAACTGAAAGGAGCAATCCTAGAAGGGGGTGTAGCGTTCGACAGGGCCCATGGCATGAATGCCTTCGAATATCCAAGTGTGGATCCCAGGTTTAATGAGGTTTTCAACAACGGTATGACAGGCCTTACCACTCTAATTATGAAGAGGATTCTTGAATTATACAATGGTTTTGAGCACGTGACTAAGCTCGTGGACGTTGGCGGAGGTTATGGGATCAATCTCAAATTGATCACATCCAAATACCCTCATGTACACGCTATTAATTTTGACTTGCCTCACGTCGTACAACATGCCCCCGTCTATGCAGGTGTGGAGAATGTGGGAGGAGATATGTTCGAGACCGTTCCTTCAGGAGATGCCATTTTTATGAAGTGCATACTGCATGATTGGAGTGATGAGCACTGCTTGAAGCTCTTGAAGAATTGCTACAAAGCTATTCCTGATGATGGAAAGGTTATTGTGGTGGACTCAATTCTGTCCATTGTGCCTGAGACAACGGCTACTGCCCAAGGTGCTTTGGGATCTGACCTCATAATGATGACTCAAAACCCAGGAGGGAAAGAGCGGACCCGGCAAGAAATCATAGAATTAGCAAAAGGATCTGGATTTAGCGGGGTCAGATTCATATGCTGTGTATGTGGCTACTGGGTTATGGAGTTCTACAAGTAA | 714 | 0.4552 | MVKLLLDQVFYKSWGELKGAILEGGVAFDRAHGMNAFEYPSVDPRFNEVFNNGMTGLTTLIMKRILELYNGFEHVTKLVDVGGGYGINLKLITSKYPHVHAINFDLPHVVQHAPVYAGVENVGGDMFETVPSGDAIFMKCILHDWSDEHCLKLLKNCYKAIPDDGKVIVVDSILSIVPETTATAQGALGSDLIMMTQNPGGKERTRQEIIELAKGSGFSGVRFICCVCGYWVMEFYK | 237 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo5g03965 | 237 | Gene3D | Vaccinia Virus protein VP39 | 1 | 237 | IPR029063 | - | |
| Pumo5g03965 | 237 | Pfam | O-methyltransferase domain | 14 | 219 | IPR001077 | GO:0008171 | |
| Pumo5g03965 | 237 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 1 | 237 | IPR016461 | GO:0008168 | |
| Pumo5g03965 | 237 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 3 | 236 | IPR029063 | - | |
| Pumo5g03965 | 237 | FunFam | Caffeic acid O-methyltransferase | 1 | 237 | - | - | |
| Pumo5g03965 | 237 | PANTHER | O-METHYLTRANSFERASE | 4 | 235 | IPR016461 | GO:0008168 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo5g03965 | Pumo-Chr5 | 89887620 | 89889039 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pumo5g03965 | 7 | 237 | Monolignol Biosynthesis Gene Families | AT5G54160 | 56.277 | 1.36e-97 | 287 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo5g03965 | K13066 | - | vun:114162418 | 415.616 |