Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03938 ATGTTGGGCATAAGTTTCAAACAAGTTCCGCACACATATCATGAGGGAATTAGCAAAGACATACCAAAAGGGTGCTTGAAAATCAAGGTGGGTCAAGGCCAAGAGCAACAGAAAATAACGGTACCCGTGGATTACCTGAAGCACCCGCTCTTTGTTCAGCTTCTGAAGGAGGCGGAGGAAGAGTATGGTTTTGCACACAAGGGAACCATAACTATCCCTTGTCAAGTGGCGCAGTTTAAGAACGTTCAACACTTGATTGATAGGGAGAGGTCCCACCACCACCACCACCACCACCACCACCTCGTTGCCTGCTTCAGGGCTTGA 324 0.4846 MLGISFKQVPHTYHEGISKDIPKGCLKIKVGQGQEQQKITVPVDYLKHPLFVQLLKEAEEEYGFAHKGTITIPCQVAQFKNVQHLIDRERSHHHHHHHHHLVACFRA 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03938 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 81 IPR003676 GO:0009733
Pumo5g03938 107 Pfam Auxin responsive protein 15 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03938 Pumo-Chr5 89544268 89545009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03938 20 80 Calmodulin-binding Proteins AT3G43120 50.820 1.21e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03938 K14488 - gmx:100500512 150.599