Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03933 ATGATTCTTTTCAGTTTCACCCCCATAATATTTCTCTTAACCCTGGCCGCCGCCGCCGCCGCCATCGTTTTGTTCCGAACGGGGTGCGCGAAGAAGCTATGGAGAAGAATCGAAGATTGGTTCCACGTGTACCAGTTCCTCAAAGTCCCAGAACTGAACGAAACGACGACGCAGCAGAACCACCTCTACAGAAAGGTCTCCCTCTACTTACATTCCCTACCTTCCATTGAAGACTCGGACTTCGCTAACCTCGTCACCGGCAAGAAGCAAAACGACATCGTCCTCTGCCTCGGCCCAAACCAAACCATCCAGGACCATTTTCTCGGAGCCACACTCTTCTGGTTCAACCAAACCGGAACCTTTGTTCTCAAGATCAGAAAGGTCGACAAGCGCCGAATCCTCCGCCCTTACCTTCAGCACATTCACACCGTCGCCGACGAAATCCAGCACCAAGGGAAGTGCGACTTGCGCCTCTTCATGAACAGCGCCGACGACTTCCAACGCTGGAGATCCGTTCCGTTCACGCATCCCTCCACGTTCGACACCATCGCCATGGAACCGGATCTCAAGAACAAGGTCAAATCCGATCTCGAATCCTTCCTCAGAGCCAAACAGTACTACCACCGCCTCGGCCGCGTCTGGAAACGGAGCTTCCTCCTGTACGGTCCTTCCGGCACCGGAAAATCGAGCTTCGTCGCCGCCATGGCCAATTTCCTCTCCTACGACGTCTACGACATCGACCTCTGCAAAATCCCTAGCGATTCGGATCTGAAACTCCTCCTCCTCCAAACGACGCCGAAATCGGTGGTGGTGATCGAGGACCTGGACCGGTTCCTCGCGGAGAAAACGGCGAGGATAAGCGCGTCGGGGATACTGAACTTCATGGACGGGCTTCTCACCTCGTGTTGCGCCGAAGAGAGGGTGATGGTGTTCACAATGAACACGAAAGAGCATGTTGACCCGAACCTGCTTCGACCGGGTCGGGTCGATGTGCATATTCATTTTCCTCTTTGCGATTTTTCGGCGTTTAAGACGCTGGCGAATAGTTACCTTGGGGTGAAGGACCATAAGTTATTCCCTCAGGTGCAGGAGATTTTTCAAAACGGAGCGAGTTTGAGTCCAGCTGAAATCGGTGAGTTGATGATCGCGAACCGGAACTCGCCGAGTCGGGCTATTAAATCGGTCATCACGGCCTTGCAAACGGACGGTGATGGCAGAGGGTGCGGCTTGATCGGACGGCAGACGGAGGATGATGAAATGGATGAACCTGATGGGGTTGTATGCGGTGAGGGTCTCCATACGGTTAAGGATTTCCGGAAACTGTACGATTTTTTCAGGTTCAGGGTTACGAGAAGATCTTCGTCGTCCAATGTTTCCTTGCCCGCCAGCCCATTGCGATAG 1401 0.5353 MILFSFTPIIFLLTLAAAAAAIVLFRTGCAKKLWRRIEDWFHVYQFLKVPELNETTTQQNHLYRKVSLYLHSLPSIEDSDFANLVTGKKQNDIVLCLGPNQTIQDHFLGATLFWFNQTGTFVLKIRKVDKRRILRPYLQHIHTVADEIQHQGKCDLRLFMNSADDFQRWRSVPFTHPSTFDTIAMEPDLKNKVKSDLESFLRAKQYYHRLGRVWKRSFLLYGPSGTGKSSFVAAMANFLSYDVYDIDLCKIPSDSDLKLLLLQTTPKSVVVIEDLDRFLAEKTARISASGILNFMDGLLTSCCAEERVMVFTMNTKEHVDPNLLRPGRVDVHIHFPLCDFSAFKTLANSYLGVKDHKLFPQVQEIFQNGASLSPAEIGELMIANRNSPSRAIKSVITALQTDGDGRGCGLIGRQTEDDEMDEPDGVVCGEGLHTVKDFRKLYDFFRFRVTRRSSSSNVSLPASPLR 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03933 466 Pfam ATPase family associated with various cellular activities (AAA) 219 337 IPR003959 GO:0005524|GO:0016887
Pumo5g03933 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 398 IPR027417 -
Pumo5g03933 466 PANTHER BCS1 AAA-TYPE ATPASE 18 400 - -
Pumo5g03933 466 Pfam Domain associated at C-terminal with AAA 32 114 IPR025753 -
Pumo5g03933 466 Gene3D - 161 352 IPR027417 -
Pumo5g03933 466 SMART AAA_5 214 339 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03933 Pumo-Chr5 89455365 89457508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03933 - K08900 gmx:100776680 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03933 5 89455365 89457508 Pumo7g00620 7 10167208 10169344 PCT