Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03928 ATGGACTCTGGTATTGTATTACCATTGTCTATGAACAATGGATTCAAAACAGGGGAATCTCCTTATTTTGAGGAAGTTATAGAGAAAGATCCCACTAGTCGATATCGTCGGTATAATGAAATATTGGGCAAGGGTGCTTTCAAGACTGTTTATAAGGGCTTTGATGAAGTTGATGGAATAGAAGTTGCTTGGAATCAAGTCCGAATTGATGAACTCCTGCAATCAACAGATGATCTTGCGAAGTTGTATTCTGAAGTTAATCTATTGAAGTCTCTAAAACATGAAAATATCATAAAGTTCTTAAATTCTTGGATTGATGATAAGAAGAAAACCATTAACATTATTACTGAGCTATTCACATCTGGAAATTTAAGACAATATCGCAAGAGGCATAGATATGTTGACATGAAAGCCATAAAAGGTTGGGCTAAACAGATACTTCAAGGCCTGGTATACCTTCATAGTCACAATCCACCTATTATCCATAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCATGGAGAAGTTAAGATAGGAGACCTTGGTTTGGCAATTGTCATGCAACAACCAACTGCTCGAAGTGTTATTGGGACTCCTGAGTTCATGGCTCCAGAACTATATGAAGAGGAATACAATGAACTAGTTGATGTCTATTCTTTTGGGATGTGCATACTGGAGATGGTAACTTTTGAGTACCCATATAGTGAATGCAAGAATCCAGCTCAAATTTATAAGAAAGTAACCTCTGGCATTGAACCTGCATCCCTTAAAAGGGTGAGTGATCCCCAAATTAAGGAGTTTATTAAGAAATGTCTCGTTCCAGCATCTGAAAGATTGTCAGCAAAAGAGCTTCTAAAAGACCCATTTCTGCAAGTTGAGAGTCCAAAGCAGCCAATCCTTGATCCTTTACAATTAACTAATAAATCTTTGAAAGCCATAGACCCTTCCATGGACCTAGATGTTGACTATCAACACATATCTTTGAGTACTTGTGTTGATGAAAGCAACCAGGAAAATCCACATTGTCTAGTTCTTGAAGTTCAGAGAACATATAAGAACAATGAGTTTAGGTTGAAAGGGACCAAAAATGAAGATAACTCAATATCATTGATCTTGCGTATTGCTGATTTATGTGGTCGAGTCAGGAATATACATTTTCTCTTTTACCTTGAGACGGATACTGCAATCTCTGTTGCCTCAGAAATGGTTGAAAATTTGGAGTTGGAAAATAATGATGTAGCTTTCATAGCTGAGCTTATTGATTATTTGATAATGAAACTCGTACCAGGGTGGAAACCCTCATTTGATTATTCATCGAGTGGAGGATTAAGTCAATGTGGTGGTTCTCCAACACTTAGAGATAACCAAACTTTAATTTCATGCCCATGGGTTCCTGTCCTTGCTAGTGTTCCATCTGAATTAGTTTTGGATCAAGATAATTGCTTTGGGTTTAATACTACTCAAAGAAAAAGTTTAGCAGCAACTCCAAAGAGCTACATATTTAATGTTGTCGGTAAGGATACTCTTGAGGGCAAACATAATTCTTCTTCTACATTGTCTAGCCTTGAAGAACGGTATTCAGAAGAATCCACAGCTTCTAATATAGTCATTGAAGATACTTGTATGAAAAATGATAACTATCTTAATTATGATGTTGTTGAAAGCTTTAAAGGATTAAGTTGTTCCACATCTGAAATGGAGCTTGGGGATGTGTATTTTGAAGGCTATAAATTGCATACTACAGATTGCAATGCTGGAGAAAACATTGAGATAAATGAATTGTCAAAGAACTTGCACTATATGACTCCAACTTTTTGTGAAACATCAGATCTTATGAGTTTGACAAGCAACTGTTCTTCTTTATCTTTAGCTGATAAAGACATTGACCTTGAACTAAAGTTTGAACTTGATGCAATTGAGTCACAATATCAACATTGGTTTCAAGAACTTTTAAGATTGAAGTCAGAGGAACTGGAAGCCGCCAAAAAGAGATATATAGCCAAGAAAAAAATTATTGTTCATTGA 2034 0.3599 MDSGIVLPLSMNNGFKTGESPYFEEVIEKDPTSRYRRYNEILGKGAFKTVYKGFDEVDGIEVAWNQVRIDELLQSTDDLAKLYSEVNLLKSLKHENIIKFLNSWIDDKKKTINIITELFTSGNLRQYRKRHRYVDMKAIKGWAKQILQGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCILEMVTFEYPYSECKNPAQIYKKVTSGIEPASLKRVSDPQIKEFIKKCLVPASERLSAKELLKDPFLQVESPKQPILDPLQLTNKSLKAIDPSMDLDVDYQHISLSTCVDESNQENPHCLVLEVQRTYKNNEFRLKGTKNEDNSISLILRIADLCGRVRNIHFLFYLETDTAISVASEMVENLELENNDVAFIAELIDYLIMKLVPGWKPSFDYSSSGGLSQCGGSPTLRDNQTLISCPWVPVLASVPSELVLDQDNCFGFNTTQRKSLAATPKSYIFNVVGKDTLEGKHNSSSTLSSLEERYSEESTASNIVIEDTCMKNDNYLNYDVVESFKGLSCSTSEMELGDVYFEGYKLHTTDCNAGENIEINELSKNLHYMTPTFCETSDLMSLTSNCSSLSLADKDIDLELKFELDAIESQYQHWFQELLRLKSEELEAAKKRYIAKKKIIVH 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03928 677 Gene3D Phosphorylase Kinase; domain 1 23 117 - -
Pumo5g03928 677 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 372 427 IPR024678 GO:0004674|GO:0005524
Pumo5g03928 677 Gene3D Transferase(Phosphotransferase) domain 1 119 298 - -
Pumo5g03928 677 FunFam Probable serine/threonine-protein kinase WNK1 22 117 - -
Pumo5g03928 677 ProSiteProfiles Protein kinase domain profile. 36 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03928 677 Coils Coil 639 659 - -
Pumo5g03928 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Pumo5g03928 677 Pfam Protein kinase domain 39 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03928 677 SUPERFAMILY Protein kinase-like (PK-like) 32 294 IPR011009 -
Pumo5g03928 677 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 24 654 - -
Pumo5g03928 677 FunFam probable serine/threonine-protein kinase WNK9 119 298 - -
Pumo5g03928 677 CDD STKc_WNK 34 293 - -
Pumo5g03928 677 SMART serkin_6 36 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g03928 677 Gene3D - 369 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03928 Pumo-Chr5 89407186 89410567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03928 613 677 MAP Kinase Kinase Kinase AT5G41990 43.077 7.67e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pumo5g03928 Pkinase 9.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03928 K08867 - gmx:100272197 822.002