Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03897 ATGAAAAACTTGAGGAGAGCTTCATCTGTCCTTCCTGTAATTCATGAAGGTACTGAGCTTGTAACTAAGATGAAATTTTTTTATCCACGGGATGAATTCCTTCAGGCATGGAAGAAAATCTTTGGAATAACGTGTGTGATGGCAGTCGCTTTGGACCTGCTCTTCTTTTACATTCCAGTGATTAATGTAGATAAAAAATGCCTTGATTTGGATGGAGCATTGCTGATCACTGACTGTGTTCTTCGCACCTCCTTTGATCTATTCTACATTATTCGCATAATGCTTCATCTTAGGACAGGTTTCTTGGTCCCTTCTTCTCGTGTTTCGGGAAGGGGTGAGGTCATTTATGATCCTGCCACTATAGCCAAAAGATACTTCACTTCACACTTCATCATTGATATTCTATCAATTATTCCACTTCCACAGGTGATTGTTTTAGCCATTAATCCAAACCTGAAAACGTCAGATCCATTTGTAGCAAAGGATTTGTTGAAGTACACAGTATCAATCCAGTGGTTGGATTTGCGCAATGTGGTAGAATCAACAACAGATCTTCATCAGAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATTTAAGGTGGCCCAATAATCTTTAG 621 0.3961 MKNLRRASSVLPVIHEGTELVTKMKFFYPRDEFLQAWKKIFGITCVMAVALDLLFFYIPVINVDKKCLDLDGALLITDCVLRTSFDLFYIIRIMLHLRTGFLVPSSRVSGRGEVIYDPATIAKRYFTSHFIIDILSIIPLPQVIVLAINPNLKTSDPFVAKDLLKYTVSIQWLDLRNVVESTTDLHQKFFYCFWWGLRNLRWPNNL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03897 206 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 178 200 - -
Pumo5g03897 206 SUPERFAMILY Voltage-gated potassium channels 30 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03897 Pumo-Chr5 89069189 89070103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03897 15 173 Ion Channels AT1G01340 47.170 2.74e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03897 K05391 - gmx:100816236 219.55