Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03869 ATGGGAAACAGTGAGGAAGAGAAATCTACTAAGACTGAAAAGCCTTCTTCACCTGTAACAACGGATCAGGCCAATCAGACCAACCAGACCAATATTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCACCATGCCACCATACTACAACTCGGCTGTGGCTTCTGGTCACGCTCCTCACCCGTACATGTGGGGGCCACCACAGCCTATGATGCCACCTTATGGGCCTCCTTATGCAGCAATTTATCCACATGGAGGGGTTTATACTCACCCTGCGGTTCCTATTGGGCCGCATACACATAGTCAAGGAGTTCCGTCTTCACCTGTTGCTGGGACTCCTTTAAGCATAGAGACACCACCCAAATCATCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGAGTTTGATGGACTTGCAATGTCAATAGGCAATGGCCATGCTGAAAGTGCAGAGCGTGGAGGCGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTTCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCAACCACTGATGGAGAAGGGAAAACTGAGATACAAGGCAGTCCCATTTCCAAAGAGACTGCAACTTCTAATAAGATGTTGGCAGTTGCCCCTGCCAGTGTTGCAGGAACAATAGTTGGACCTGTAGTTTCTTCAGGTATGACCACCGCGCTGGAGCTGAGAAATCCTTCCAGTGCTCATTCTAAAACAAATACCCCAAGTGCCCCACAACCTTGTTCAGTATTGCCTGCAGAAGCTTGGTTACAGAATGAGCGTGAGCTGAAACGTGAGAGGCGGAAACAATCAAATCGAGAATCTGCTAGAAGGTCCAGACTAAGGAAGCAGGCTGAAACTGAAGAACTGGCACGAAAAGTTGAATCCTTGAATGCTGAGAATGCGACACTGAAATCAGAAGTAAATCGACTGACTGGAAGTTCTGAAAAAATGAGGGTGGAAAATGCTACATTAAGGGAAAAACTTAAAAATGCTCAACTGGGCCAAACACAAGAGATAACTTTGAACATAATTGACAGTCAGAGGGCTACACCTGTAAGTACAGAAAACTTACTATCAAGAGTTAATAATAATTCCGGTTCTAATGATAGAACTGTGGAGGATGAGAATGGTTTTTGCGAAAATAAACCAAACTCTGGTGCAAAGCTGCATCAACTACTGGACACAAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1287 0.4577 MGNSEEEKSTKTEKPSSPVTTDQANQTNQTNIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAIYPHGGVYTHPAVPIGPHTHSQGVPSSPVAGTPLSIETPPKSSGNTDQGLMKKLKEFDGLAMSIGNGHAESAERGGENRLSQSVDTEGSSDGSDGNTSGANQTRRKRSREGTPTTDGEGKTEIQGSPISKETATSNKMLAVAPASVAGTIVGPVVSSGMTTALELRNPSSAHSKTNTPSAPQPCSVLPAEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNAENATLKSEVNRLTGSSEKMRVENATLREKLKNAQLGQTQEITLNIIDSQRATPVSTENLLSRVNNNSGSNDRTVEDENGFCENKPNSGAKLHQLLDTSPRADAVAAG 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03869 428 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 399 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pumo5g03869 428 MobiDBLite consensus disorder prediction 384 428 - -
Pumo5g03869 428 MobiDBLite consensus disorder prediction 106 135 - -
Pumo5g03869 428 MobiDBLite consensus disorder prediction 203 220 - -
Pumo5g03869 428 MobiDBLite consensus disorder prediction 254 273 - -
Pumo5g03869 428 Pfam Disordered region downstream of MFMR 133 261 - -
Pumo5g03869 428 MobiDBLite consensus disorder prediction 162 188 - -
Pumo5g03869 428 Coils Coil 302 336 - -
Pumo5g03869 428 Coils Coil 275 295 - -
Pumo5g03869 428 Gene3D - 285 340 - -
Pumo5g03869 428 MobiDBLite consensus disorder prediction 14 33 - -
Pumo5g03869 428 CDD bZIP_plant_GBF1 287 334 IPR045314 GO:0003700|GO:0006355
Pumo5g03869 428 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Pumo5g03869 428 MobiDBLite consensus disorder prediction 100 135 - -
Pumo5g03869 428 MobiDBLite consensus disorder prediction 254 269 - -
Pumo5g03869 428 MobiDBLite consensus disorder prediction 1 33 - -
Pumo5g03869 428 FunFam G-box binding factor 3 285 340 - -
Pumo5g03869 428 SUPERFAMILY Leucine zipper domain 285 339 IPR046347 GO:0003700|GO:0006355
Pumo5g03869 428 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 284 347 IPR004827 GO:0003700|GO:0006355
Pumo5g03869 428 MobiDBLite consensus disorder prediction 153 220 - -
Pumo5g03869 428 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 289 304 IPR004827 GO:0003700|GO:0006355
Pumo5g03869 428 Pfam bZIP transcription factor 282 344 IPR004827 GO:0003700|GO:0006355
Pumo5g03869 428 SMART brlzneu 282 346 IPR004827 GO:0003700|GO:0006355
Pumo5g03869 428 MobiDBLite consensus disorder prediction 284 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03869 Pumo-Chr5 88734760 88740324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03869 1 428 bZIP Transcription Factor Family AT2G46270 51.963 4.61e-123 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo5g03869 MFMR_assoc 1.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03869 K09060 - gmx:100781875 755.362